PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1204630.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 82aa MW: 9345.78 Da PI: 10.8449 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.7 | 4.8e-12 | 2 | 36 | 12 | 48 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Pd.00g1204630.m01 2 IIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 36 5788999****.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence |
MIIHLQALLG NRWAAIASYL PQRTDNDIKN YWNTHLKKKL RKLQTGLDGH DHRNSQDGFS 60 GLTKLPLMHP TPKTLRNCSK AG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 2e-24 | MYB family protein |