PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g120020.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 839aa MW: 93587.2 Da PI: 6.5046

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g120020.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.2	2.9e-08	481	519	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + Pd.00g120020.m01 481 MFQNflHPYPKDAEKHVLAVKSGLTRNQVSNWFINARVR 519 5887779******************************88 PP
2	BELL	76.7	3.5e-25	355	424	1	71
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 ++qe++ kk+kLl+ll+++d+ Y+q+v++++tv+s+F+a+++ ++ ++++++Al++iS +++L+++i+ + Pd.00g120020.m01 355 QKQEIKTKKSKLLTLLQMLDDCYNQCVDEIHTVVSAFHAATETDP-HIHARFALQTISVLYKNLRERISTH 424 579****************************************.********************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MYNVPTDLTA RNSVVMDGIV PHTTMNSLVQ SYSFDLNHQN HGMALVPALS SFPGEPVVHS 60 HSEFNGTNGD CIVESNPFVT SQRRHNVRDS SFISSSFADN TVFQATPHSA ASLATLLAAR 120 GSLQENLNNL AISGTPVSSS EAYASNDCSN NSNSLFATSV NCGYDEILGS ISSQWEINKY 180 AAPSELGERT SVRTGFQPYS PTGNLDPNGW LSSNGENAMT YHSYSSCKFS NELALTLATS 240 SPAIVGGVDI RNQCSDIGSS GMAHPSLNQT RFGSSEQNSC NSEELSLSFG SYKPPQLSQV 300 ICGSRYLHVV QEILFDIASY SLENLDQSSF SSARIMSENA DSDSRFEVHK EPALQKQEIK 360 TKKSKLLTLL QMLDDCYNQC VDEIHTVVSA FHAATETDPH IHARFALQTI SVLYKNLRER 420 ISTHFLAMTA NSNPASPTES ERSFEIHKQL ALQHLKKKEH QIWRPQRGLP ERSVSVLRAW 480 MFQNFLHPYP KDAEKHVLAV KSGLTRNQVS NWFINARVRL WKPMIEEMYS EMNRRKTRQS 540 DNTERNNRSH HHNIRAMAGL VVVFDFDKTI IDWDSDNWVV EELGVKDLFT QLLPTMPWNS 600 LMDTMMRELH SRGKTIEDIA ECLKKIPLHP NIASAIKSAH AFGCDLRVLS AANEFFIDTI 660 LKHHGLMDCF SEINTNPSII DEQGRLRILP YHDFHSSSHG CTICPPSMCK GLIMEKIQAS 720 VAADGKKHKQ FIYVGDGAPD FCAGLKLEEG DFLMPRRDFP IWDLISANPS FTKAKIYEWN 780 ECDELGAVLL NTVNAFFTAN KSRSTDQLVP VDCKSQNSST CLTAHEAFQN ALPVPLPRQ

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MYNVPTDLTA RNSVVMDGIV PHTTMNSLVQ SYSFDLNHQN HGMALVPALS SFPGEPVVHS  60
HSEFNGTNGD CIVESNPFVT SQRRHNVRDS SFISSSFADN TVFQATPHSA ASLATLLAAR  120
GSLQENLNNL AISGTPVSSS EAYASNDCSN NSNSLFATSV NCGYDEILGS ISSQWEINKY  180
AAPSELGERT SVRTGFQPYS PTGNLDPNGW LSSNGENAMT YHSYSSCKFS NELALTLATS  240
SPAIVGGVDI RNQCSDIGSS GMAHPSLNQT RFGSSEQNSC NSEELSLSFG SYKPPQLSQV  300
ICGSRYLHVV QEILFDIASY SLENLDQSSF SSARIMSENA DSDSRFEVHK EPALQKQEIK  360
TKKSKLLTLL QMLDDCYNQC VDEIHTVVSA FHAATETDPH IHARFALQTI SVLYKNLRER  420
ISTHFLAMTA NSNPASPTES ERSFEIHKQL ALQHLKKKEH QIWRPQRGLP ERSVSVLRAW  480
MFQNFLHPYP KDAEKHVLAV KSGLTRNQVS NWFINARVRL WKPMIEEMYS EMNRRKTRQS  540
DNTERNNRSH HHNIRAMAGL VVVFDFDKTI IDWDSDNWVV EELGVKDLFT QLLPTMPWNS  600
LMDTMMRELH SRGKTIEDIA ECLKKIPLHP NIASAIKSAH AFGCDLRVLS AANEFFIDTI  660
LKHHGLMDCF SEINTNPSII DEQGRLRILP YHDFHSSSHG CTICPPSMCK GLIMEKIQAS  720
VAADGKKHKQ FIYVGDGAPD FCAGLKLEEG DFLMPRRDFP IWDLISANPS FTKAKIYEWN  780
ECDELGAVLL NTVNAFFTAN KSRSTDQLVP VDCKSQNSST CLTAHEAFQN ALPVPLPRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	2e-83	TALE family protein