PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1198320.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 220aa MW: 25184.9 Da PI: 6.3076

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1198320.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.5	4.7e-31	18	70	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 prlrWtp+LHe Fveave+LGG++kAtPk+il++m+vkgL ++hvkSHLQ+YR Pd.00g1198320.m01 18 PRLRWTPQLHELFVEAVESLGGKHKATPKRILQTMSVKGLKISHVKSHLQMYR 70 9**************************************************** PP
2	Myb_DNA-binding	54.2	3.3e-17	19	70	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++el+v+av+ lGg+ t+k+I +tm kg+ ++ks++q+y+ Pd.00g1198320.m01 19 RLRWTPQLHELFVEAVESLGGKhkaTPKRILQTMSvKGLKISHVKSHLQMYR 70 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MKSYQKIGVR NYQKSDHPRL RWTPQLHELF VEAVESLGGK HKATPKRILQ TMSVKGLKIS 60 HVKSHLQMYR GVNDNAYSQD HSSNVFSIFS PQTQTQSRPS ENYYLRYEPH VMFSETDEET 120 KGRILTQEEA AGKQQNQNTL TPELSRLSMD EETCQLYGFC ELSLSFNPTV TTMAQLRKES 180 ELWPSADEHN TSQSSSTGNF SNIQDFQEVG SNDINLDLTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-27	G2-like family protein