PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g119310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 193aa    MW: 21448.6 Da    PI: 4.2571
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g119310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.2e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+ Ed++l  ++k +G g W++ +++ g++R++k+c++rw++yl
  Pd.00g119310.m01 14 RGAWTALEDKILTSYIKAHGEGKWRSLPKRAGLKRCGKSCRLRWLNYL 61
                      89********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MGRSPCCSKQ GLNRGAWTAL EDKILTSYIK AHGEGKWRSL PKRAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SFDEEELIIP SDDYNQTANA SSSTNPSELQ AHQTQLTDQQ VNVGDSTNNL  120
NNNYGCTDED DDIEAKGGFC NAFQSLPLDE AMINATWTGG NDCDLEDYGA TLDLDSLAFL  180
LDSEEWPSQE NIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.13e-39MYB family protein