PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g119280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 288aa MW: 32608.6 Da PI: 5.4838 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3e-15 | 14 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d+vk +G g+W + +r+ g ++R++k+c++rw++yl Pd.00g119280.m01 14 KGAWTALEDQILIDYVKDHGEGRWGKLSRETGeptltlrtsLKRCGKSCRLRWLNYL 70 79*****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 76 | 120 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++ Pd.00g119280.m01 76 RGNITEDEEDLIIRLHKLLGNR-WTLIAGRLP-GRTDNEIKNYWNSV 120 7999******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MGRSYRCDKD GLSKGAWTAL EDQILIDYVK DHGEGRWGKL SRETGEPTLT LRTSLKRCGK 60 SCRLRWLNYL RPEIKRGNIT EDEEDLIIRL HKLLGNRWTL IAGRLPGRTD NEIKNYWNSV 120 LRKKAQESHS ERSRNEWKTT KDTEKAVPSL KMDSHFIQNG LTPTSCINNE LLGTTNTLAE 180 PFISGVEATN MEVKSDSSDG FLPITRENDM TWNFIRDLNA GELGISEFLH TDFSKLCELN 240 TTIFDCTSGC RNGSLMSTST AEAPLNLQEW LNDWAADDNC LPEAAFGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 4e-53 | MYB family protein |