PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1190670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28038.5 Da PI: 5.6787 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17 | 1.1e-05 | 35 | 84 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r + erE++ R++ N+ f eL + l + ++ + Ka+iL +A++ +k+L Pd.00g1190670.m01 35 KRIHKAEREKQKREHFNELFLELADALELN----QQNNGKASILCEATRLLKDL 84 688899*********************998....68899999******999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGSQDPVPAA DKANVTEASV RGACSGKKIQ GKIPKRIHKA EREKQKREHF NELFLELADA 60 LELNQQNNGK ASILCEATRL LKDLIGQIEY LQKENASLLS ESNYMTIEKN ELREDNSALE 120 TQIEKLHSEI EDKVVQSKPG LNAAPPCAEL RPEVASHFTG TSISLPTQDP SLQQAPAVFV 180 MPLCPDLQSY PLPDAAQLTS NTTSHVSKPH ARYPTSVDSW PSQLLGEKPT AGKESRQLGN 240 SSNICRSRET DPDNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 5e-56 | bHLH family protein |