PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1176320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 383aa    MW: 41412.2 Da    PI: 5.3725
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1176320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.21.5e-37137191660
             zf-Dof   6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                         +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++
  Pd.00g1176320.m01 137 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 191
                        58***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MVGGVTPKKG GTEHLGLPVF NSVAEAKAET KANASVIYVP PPFAAAAIME AMEAELDLVV  60
CITEGIPQHD MVRVKAALNR QSKTRLIGPN YPGIIKLGEC KIGIMPAPVE QMLQCPSGPF  120
IMMDKRSWNK PHIEVAPNCP RCASSNTKFC YYNNYSLSQP RYFCKGCRRY WTKGGSLRNV  180
PVGGGCRKNR RGKAAKLSQA DRASMSCFNH NSSSSDDTSG QHSSGTDNQP GGGNGSDIDL  240
AAVFAKFLNN NSSSPADEHD HLDQDHEPNL VISSSELNDV DGSQNSSKAD QDLVEAVDHL  300
LGGLGLLGND DQVVQDVFWS DDAATTSSLT SSTASLSWQP MVHLQELDYS LPSDDDHMKI  360
PTNLCSDNWS SFDFSGFEVF SRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.13e-39Dof family protein