PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1174560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 310aa MW: 35180.9 Da PI: 4.4431 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.6 | 5e-19 | 73 | 127 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa+ k+ Pd.00g1174560.m01 73 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKN 127 56689***********************************************995 PP | |||||||
2 | HD-ZIP_I/II | 126.1 | 1.5e-40 | 73 | 164 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+ +qv++LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+k+kqlEk+y++Lk ++d+lk+++++L ke+ +L++e+++ Pd.00g1174560.m01 73 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKNKQLEKEYDSLKVSFDKLKADHDNLLKENGSLKNEIDS 164 9**************************************************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MNVIFQNEKL PCSSDVLESI WVPTSSSSFH GSNSMVNFES ASGEDSLDRS FFRPIDKENG 60 DDDYDASLNQ PGKKRRLTVD QVQFLEKNFE VENKLEPERK AQLAKELGLQ PRQVAIWFQN 120 RRARFKNKQL EKEYDSLKVS FDKLKADHDN LLKENGSLKN EIDSLKDMLI LKDKGKPGKR 180 NLELHDANNI ISSDVKPQSA TPNAASDNVP MVVCKQEDAS SAKSDVFDSD SPHCTENHSS 240 LLEPADSSHV FEPAEQSDFS QDEDDDLSRT LLPPPYFLKL EDSCYDEPPA SSSNFVFPME 300 DQQPFCFWPY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 129 | RRARFKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-40 | HD-ZIP family protein |