PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1170370.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 322aa    MW: 36561.8 Da    PI: 6.3237
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1170370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.2e-093661127
                       TSSS-HHHHHHHHHHHHHTTTT-HHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktI 27
                       r rWT+eE++++++a k++G   W++I
  Pd.00g1170370.m01 36 RERWTEEEHKKFLEALKLYGRA-WRKI 61
                       78******************88.***9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MRSSFSRINM MLKDQFSNGN DSAPKARKPY TITKQRERWT EEEHKKFLEA LKLYGRAWRK  60
IEGLAICFEG LVVSISSDQV LVLYYHDPTH NNELESEVKG QQQHSDYEIS EEEENGEISD  120
DDEDSDQLPS DVESSGDEEE GHTKCPFILW ASKIDRDEQT FAIKTLSLEH ECTRVDKLKY  180
TNSRWLSKRF ADKIRKNPDW DVGAFKAEVL EQYHMNVSNY QIYRAKNLSK AVPNQPNQGS  240
VASSTVQGAA QVGNGTTEMP NNFSSSQPHM SSSQPLDMSS QPLSYTGATS SSSQPPKSPA  300
KRVKGPAMRF KCPAMKLKPW MF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.13e-22MYB_related family protein