PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1167470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 27341.9 Da PI: 9.6127 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1e-19 | 120 | 170 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a+++a+ +++g Pd.00g1167470.m01 120 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 170 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MYGQSGTDAD ITLLDSIRRH LLGETDLRIG NSMANSVTGP IFSRSSSFSS LYPCLTENWG 60 DLPLKEDDSE DMVLYGVLRD AVLTPVSEVP EKKPAPVQPV RPAKQPAQAG PAVVPAKGKH 120 YRGVRQRPWG KFAAEIRDPA KNGARVWLGT FETAEDAALA YDRAAYRMRG SRALLNFPLR 180 VNSGEPDPIR VTSKRSSPEP SSSSSESGSP KRRKKVAVLD PAQAGLEMGA GIGQQQVGGQ 240 VVVSCTRGEQ LLVS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 210 | 216 | PKRRKKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 9e-60 | ERF family protein |