PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1163630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 334aa    MW: 36635.1 Da    PI: 6.662
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1163630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.56.4e-28150204156
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++
  Pd.00g1163630.m01 150 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 204
                        5689*****************.********************************86 PP
2Myb_DNA-binding40.18.7e-13153202248
                        SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          WT+e++ ++v+av+qlG +   +++I + mg   +t+ ++ s++qky+
  Pd.00g1163630.m01 153 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 202
                        57********************************889************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MLILSPLTDG HHQLKEEKQL GGGGRDEGEV EGFDFNGGNS VGSAGLDFPE FSGGMGNLLD  60
SIDFDDLFIG IHDGDVLPDL EMDSEILDFS AHRDHGDEYY HNNAKTTSAS QHEQNQLLNQ  120
SSSPKESADQ KLARKSSSTA QSKNSHGKRK VKVDWTPELH RRFVQAVEQL GVDKAVPSRI  180
LELMGIDCLT RHNIASHLQK YRSHRKHLLA HASYWHHPPP HHQRVPNALT PGTPCFPRQL  240
ATATQHRFPA PPVPGIPPHA MYKLDTGIAV PSPQSGPHPL VDFHPSNESI DAAIGDVLSK  300
PWLPLPLGLR PPATDSVMVE LQRQGIPKIP PSCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44190.15e-50G2-like family protein