PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1163050.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 272aa MW: 31642.6 Da PI: 7.7225 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 89.1 | 5.5e-28 | 14 | 114 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdqki 88 +r+ws+eDe+ lL+ l+d ++g+ ++d+ fye vk +++++ ++ q+veK+rrLKkK+++ v+k ++gke++f+++hd+ + Pd.00g1163050.m01 14 RKRVWSKEDELELLRSLLDDYYSRGQirTTVKDTASFYEEVKPKLKLECNRVQMVEKLRRLKKKYHNVVNKmndmNSTGKEFRFKNPHDKVV 105 58*****************9999999877888************************************9998887789************** PP DUF573 89 felskkiWg 97 fels kiW+ Pd.00g1163050.m01 106 FELSDKIWN 114 ********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MMFEAPEENK KRRRKRVWSK EDELELLRSL LDDYYSRGQI RTTVKDTASF YEEVKPKLKL 60 ECNRVQMVEK LRRLKKKYHN VVNKMNDMNS TGKEFRFKNP HDKVVFELSD KIWNVVDSHE 120 DYAPNSKYVS ICNNVKVKKE EDNAGSSSVA DHEQPQMRHA WSHSRLTTTY DENNKAHDVL 180 NDNGTTSSLD INNNNNNVDD NMKNDIPGLI IEGLAMNPLP LNLSKFGSGV EVADEKWRKQ 240 QILELEAYSK RLDLVQHQVK AAMDELRSKG VE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 9 | 16 | NKKRRRKR |
2 | 10 | 15 | KKRRRK |
3 | 10 | 16 | KKRRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 4e-21 | GeBP family protein |