PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1159630.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 436aa    MW: 48688.6 Da    PI: 8.636
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1159630.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.1e-20247296356
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pd.00g1159630.m02 247 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 296
                        8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MDGKFPKLET FIEKQLPSYF PRMESDIRSN LFGDPAIWCG SGSKSSLSPE SSSSSTEEFS  60
SSGSNLIDNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPR TSPPSFSSNR SKFPNLTLFL  120
QEPNLLDPSS SSSSLSSTRV EVVDSLGKTK GCDEPSMFPY LSIPSFPTPQ VIDQIQRQPG  180
MIEWLKLNQN LASHSSKGFN DYWLSTTKTQ PMKRTGRSSR LQQQINQHHK QPHNNLSSAS  240
SSPGKLFRGV RQRHWGKWVA EIRLPRNRTR VWLGTFDTAE EAAIAYDTAA YMLRGEHAHL  300
NFPDLKHQLK ANALKGNTAA LLEAKLQAIS SSQAHQKAIM ESKSSQLASP NKHSADDHDD  360
HKYSNLMINS NFSQTPTRKE WQYGLESKVG SDHQVVIESK KSQQELVSAD VDAVQLSRMP  420
SLDMDMIWDA LLVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-62ERF family protein