PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1154300.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 336aa    MW: 37976 Da    PI: 5.0808
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1154300.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.5e-1957110356
                        --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                        k+++++ eq+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  Pd.00g1154300.m02  57 KKRRLSVEQVKALEKNFEVENKLEPERKVKLAHELGLQPRQVAVWFQNRRARWK 110
                        56689************************************************9 PP
2HD-ZIP_I/II130.66.2e-4256148193
        HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                        ekkrrls eqvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+d+ +Lk++yd+lk + ++L++e+e+L +e+k
  Pd.00g1154300.m02  56 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLAHELGLQPRQVAVWFQNRRARWKTKQLERDFGVLKANYDSLKLNYDNLQHENEALVKEIK 147
                        69***************************************************************************************998 PP

        HD-ZIP_I/II  93 e 93 
                        +
  Pd.00g1154300.m02 148 Q 148
                        7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MKRLGSSDSL GAMISICPST EEHSPRNNHV YRRDFPSMLD GLDEEGCVEE GGHVSEKKRR  60
LSVEQVKALE KNFEVENKLE PERKVKLAHE LGLQPRQVAV WFQNRRARWK TKQLERDFGV  120
LKANYDSLKL NYDNLQHENE ALVKEIKQLK SKLQEENTES NNLSVKEEQM VAKDQSNYEV  180
VDHERSKSPP PPPPGSSVPA TESKELNFES FNNTNNGAVG LEAVSLFPDF KDGSSDSDSS  240
AILNEDNSPN LTISSSGMLQ NHQLMKSPAS TSLKFNCSSS SSPSSSSMNC FQFQKTYHPQ  300
FVKIEEHNFF SSEEACSFFS DEQAPTLQWC CPDQWN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15786KKRRLSVEQVKALEKNFEVENKLEPERKVK
2105113RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-64HD-ZIP family protein