PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1154300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 337aa    MW: 38047.1 Da    PI: 5.0808
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1154300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.5e-1958111356
                        --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                        k+++++ eq+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  Pd.00g1154300.m01  58 KKRRLSVEQVKALEKNFEVENKLEPERKVKLAHELGLQPRQVAVWFQNRRARWK 111
                        56689************************************************9 PP
2HD-ZIP_I/II130.66.2e-4257149193
        HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                        ekkrrls eqvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+d+ +Lk++yd+lk + ++L++e+e+L +e+k
  Pd.00g1154300.m01  57 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLAHELGLQPRQVAVWFQNRRARWKTKQLERDFGVLKANYDSLKLNYDNLQHENEALVKEIK 148
                        69***************************************************************************************998 PP

        HD-ZIP_I/II  93 e 93 
                        +
  Pd.00g1154300.m01 149 Q 149
                        7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MKRLGSSDSL GAMISICPST AEEHSPRNNH VYRRDFPSML DGLDEEGCVE EGGHVSEKKR  60
RLSVEQVKAL EKNFEVENKL EPERKVKLAH ELGLQPRQVA VWFQNRRARW KTKQLERDFG  120
VLKANYDSLK LNYDNLQHEN EALVKEIKQL KSKLQEENTE SNNLSVKEEQ MVAKDQSNYE  180
VVDHERSKSP PPPPPGSSVP ATESKELNFE SFNNTNNGAV GLEAVSLFPD FKDGSSDSDS  240
SAILNEDNSP NLTISSSGML QNHQLMKSPA STSLKFNCSS SSSPSSSSMN CFQFQKTYHP  300
QFVKIEEHNF FSSEEACSFF SDEQAPTLQW CCPDQWN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15887KKRRLSVEQVKALEKNFEVENKLEPERKVK
2106114RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-64HD-ZIP family protein