PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1153120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 662aa MW: 73253.5 Da PI: 6.032

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1153120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.7	2.2e-18	158	249	1	90
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+l++sdv+++gr+vlpkk aee+ +++ +e+++l+++d s ++W +k++y ++ks++y+l+ ++ +Fvk+n+L++gDf+ + d Pd.00g1153120.m01 158 FKKELKNSDVGSLGRIVLPKKEAEENlpMLSDKEGIQLMIRDvYSDQEWGLKYKYwsNNKSRMYLLE-NTGDFVKQNKLEVGDFICLLED-- 246 89************************77777899**8888***99855555556555.**************988733.. PP SEE CS B3 88 sef 90 +++ Pd.00g1153120.m01 247 EDK 249 333 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MSCSPSTTCS PSTTQYYCYP AQYLAPNPGL QFQYAYPYQQ AGQPMYPFLV SGQPNVVVST 60 EQDSLARSGW TLDALVSKAA RKERRMARQR SLSLSRNNTN AAASSPSSRR HSPFPWNEDD 120 DQGSMSTSSS SAGTDMQNIN KHLYTFCTPD NKKLRVMFKK ELKNSDVGSL GRIVLPKKEA 180 EENLPMLSDK EGIQLMIRDV YSDQEWGLKY KYWSNNKSRM YLLENTGDFV KQNKLEVGDF 240 ICLLEDEDKN LSLFELIFFH YDDYILRRIV CEARDEEDAS SSSLALLVQQ LQKEQEANTI 300 IALSMTCASS PHIQCEEAND ATGHIKTSMQ SSTLAGVEPA PSPSPSQRRA MTRMANDDQF 360 ETDDCYKGLG TLPEVDRYKY SATTSITKPK RPISLFLSST SSSRPTTVIF NAAAADVETS 420 FFDNEDPEFD GVFEPPEVPE GFVPPPSFDD ESSETEDEIA AAYEELYGPA YSGVSVLGND 480 IYVMDSNVKK TGAFGKLKKE KIRDGFEERV VQVRRVTKVV KGGKQLHFRA IVVVGDKQGQ 540 VGVGVGKAKE VIGAVQKSAV NARRNIISVP MTKYLTFPHR SEGDYGAAKV MLRPASPGTG 600 VIAGGSVRIV LEMAGVENAL GKQLGSKNAL NNARATVVGI QKMRQFSDVA RERGIPMEEL 660 WK

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MSCSPSTTCS PSTTQYYCYP AQYLAPNPGL QFQYAYPYQQ AGQPMYPFLV SGQPNVVVST  60
EQDSLARSGW TLDALVSKAA RKERRMARQR SLSLSRNNTN AAASSPSSRR HSPFPWNEDD  120
DQGSMSTSSS SAGTDMQNIN KHLYTFCTPD NKKLRVMFKK ELKNSDVGSL GRIVLPKKEA  180
EENLPMLSDK EGIQLMIRDV YSDQEWGLKY KYWSNNKSRM YLLENTGDFV KQNKLEVGDF  240
ICLLEDEDKN LSLFELIFFH YDDYILRRIV CEARDEEDAS SSSLALLVQQ LQKEQEANTI  300
IALSMTCASS PHIQCEEAND ATGHIKTSMQ SSTLAGVEPA PSPSPSQRRA MTRMANDDQF  360
ETDDCYKGLG TLPEVDRYKY SATTSITKPK RPISLFLSST SSSRPTTVIF NAAAADVETS  420
FFDNEDPEFD GVFEPPEVPE GFVPPPSFDD ESSETEDEIA AAYEELYGPA YSGVSVLGND  480
IYVMDSNVKK TGAFGKLKKE KIRDGFEERV VQVRRVTKVV KGGKQLHFRA IVVVGDKQGQ  540
VGVGVGKAKE VIGAVQKSAV NARRNIISVP MTKYLTFPHR SEGDYGAAKV MLRPASPGTG  600
VIAGGSVRIV LEMAGVENAL GKQLGSKNAL NNARATVVGI QKMRQFSDVA RERGIPMEEL  660
WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	1e-45	B3 family protein