PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1149890.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 404aa MW: 42913.3 Da PI: 7.4312 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68.8 | 8.5e-22 | 301 | 363 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L+ eN L++e+++++ e+++l se+ Pd.00g1149890.m01 301 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKDENANLRSEVSRIRSEYEQLLSEN 363 89**********************************************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 404 aa Download sequence |
MDKPAKEKEK ESKTTPASTQ EQSATTSAGT VNPDWSGFQA YSPIPPHGFL ASSPQAHPYM 60 WGVQHIMPPY GTPPHPYVAM YPHSGLYAHP SMPPGSYPFS PFAMPSPNGI VEASGNTPGS 120 MEADGKPSEV KEKLPIKRSK GSLGSLNMIT GKNNEPGKTS GASANGVHSK SAESASEGTS 180 EGSDANSQSD SQLKSGGRQD SLEGDASQNG SSAHGSQNGA PNTHTMLNQT MAIMPITAAG 240 APGAVPGPAT NLNIGMDYWG APPSSGVPAM RGKVPTTPVP GGLVTAGSRD SVQSQLWLQD 300 ERELKRQRRK QSNRESARRS RLRKQAECDE LAQRAEALKD ENANLRSEVS RIRSEYEQLL 360 SENASLKEKL GEIPGHEDPR SARSEQKLSN DTKQIAQTEV HGGQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 318 | 324 | RRSRLRK |
2 | 318 | 325 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-160 | bZIP family protein |