PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1147300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 257aa MW: 29347.4 Da PI: 7.9304 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 32.9 | 2.1e-10 | 42 | 109 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 ++Y++YA++vGF ++k++skk + ge + t+ Cs+ g ++++ ++ ++ ++ +++C a+l+ + ++ Pd.00g1147300.m01 42 DYYKKYANRVGFPMKKRTSKKG-DCGELKYVTLSCSRLGIPQSTASN---VLKPYTSIKCNCMAQLMAEYKS 109 69**************999887.8889****************9988...7788888999999999888775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MSEENDEVEI GETGLENTMS PEEATQEPKV HMIFNTADEV LDYYKKYANR VGFPMKKRTS 60 KKGDCGELKY VTLSCSRLGI PQSTASNVLK PYTSIKCNCM AQLMAEYKSF SADFRCSTHY 120 FMEKQAQGVY TIAKFKEFQD ELTEKYILRK WGKDVTRRHT KIKISNNESN ATLVAHQCDK 180 MQKTFDEIKE LATDSEERCV IVMAWMQKLK EQLSNHNNVC GGTQPTPKSP TSRNFDNCVN 240 EISNSKKILT PLAQLAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 2e-06 | FAR1 family protein |