PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1144910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 586aa MW: 65538.5 Da PI: 4.3508 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79 | 1e-24 | 141 | 259 | 13 | 128 |
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 +l ++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ + kya++ r nrat +g+Wk tgk ++v+s+ ++ Pd.00g1144910.m01 141 QLFGRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPEYKYANSPRCNRATGKGFWKITGKPRQVKSRqlPKS 229 678899*******99666...**************8444553333778**************************************866566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++ k+tL+f++gr +k+++t Wv +ey l Pd.00g1144910.m01 230 VTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 259 677889**********************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 586 aa Download sequence |
MISVDEDHVW EEYVKSHDDA RGFRFKVIEH WDDIVDLCGK NNATGWHAET GADAIEVMTP 60 PTNEVEHVEL DGDTQAEGGM SSSMSTTEES LLDLLPKFRF HPSEEEMVNL LKNKVEGQDS 120 QAMPDEIVDK PWDLPDNESV QLFGRFLKRM MQGKASQSIP EIDVYKYEPW DLAELMFPDS 180 PYQPRAWFSF SRPEYKYANS PRCNRATGKG FWKITGKPRQ VKSRQLPKSV TCKKRTLTFH 240 EGRVSKSRNT GWVRQEYYLT PTDPGSNPNQ LSGFVLCRMK NKSTDNESDN KKQQDVSICV 300 ESADPGIAGC MASNSELDQA AGIHLIPDAE EHLTYKELEH VLLGSGNQND GEPGGFVSSD 360 FDDMIQELCA KGGEYLDLPS PPPEPPRQHQ LPQLGNVPVT GDYFGSNSND QAAAINHMIP 420 DPEELLAYKE LERVLGSCNP DDDEPGGCVS SNMLQKLCAQ LGEELDSPIP PPGPPELGNV 480 PYVYTDECSS WPSPTGDNDS SLPNKNSIPT NYDSKQVSNT ASNFENQTRS SEIYSQAEEN 540 RESFFRQFEL EDYILPIVPR TGRFLHANNY IGCNELQSAA LFPQSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G10480.2 | 7e-28 | NAC family protein |