PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1140340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 303aa    MW: 33911.9 Da    PI: 5.0239
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1140340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.6e-35271172101
                        HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
       HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                        Fl+k+y++++d++++++isw+++g+sfvv++++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+l
  Pd.00g1140340.m01  27 FLTKTYQLVDDPTIDDVISWNDDGSSFVVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVIPDR---------WEFSNDCFRRGEKRL 109
                        9****************************************************************999.........*************** PP

                        XXXXXXXX CS
       HSF_DNA-bind  94 lekikrkk 101
                        l++i+r++
  Pd.00g1140340.m01 110 LCEIQRRR 117
                        ******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MAPTSVEPNG GESTSGESSH RALPTPFLTK TYQLVDDPTI DDVISWNDDG SSFVVWNPTV  60
FARDLLPKYF KHNNFSSFVR QLNTYGFRKV IPDRWEFSND CFRRGEKRLL CEIQRRRIMP  120
AAPSVAVSPM ATTAVVPNAK PMISPSNSGE EQVISSSSSP IRAPSELMDE NEKLRKENMQ  180
LTKELAEVKS LCNNIFSMVS NYAYAQSESG FPYVKPLDLM PEKRFSSDGE KEEEEASPKL  240
FGVAIGAKRA RETVGDGVEE DETGLRLQQP SGGGDVKSEP IDVDRQETPW LNQRHRANQR  300
VCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-95HSF family protein