PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1133130.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 233aa    MW: 26414.9 Da    PI: 8.8148
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1133130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.5e-171360148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       rg+W+++Ed++l+d+++++G g+W+t ++  g+ R++k+c++rw +yl
  Pd.00g1133130.m01 13 RGAWSKQEDLKLIDYIRKHGEGCWRTLPQAAGLLRCGKSCRLRWINYL 60
                       89******************************99************97 PP

2Myb_DNA-binding52.21.4e-1666111148
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
  Pd.00g1133130.m01  66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111
                        8999******************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MRKPCCDKQD TNRGAWSKQE DLKLIDYIRK HGEGCWRTLP QAAGLLRCGK SCRLRWINYL  60
RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLISMGI  120
DPNNHRPNTI YLPRPHHKNS QAVSSTAKLS AGLKTPTNDQ PTRSGGNNCD QVSDGTSCLE  180
DESCGHQLPD LNLDLTMTAP LSNSEPENLK EEQNVMSLKC HRNLPRPPIS FLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.14e-78MYB family protein