PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1132990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 226aa    MW: 25376.8 Da    PI: 9.3228
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1132990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-1969123256
                        T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                        rk+ ++tkeq + Lee F+++++++ +++e LA++l+L  rqV vWFqNrRa+ k
  Pd.00g1132990.m01  69 RKKLRLTKEQSRLLEESFRQHHTLNPKQKEALAMQLKLRPRQVEVWFQNRRARSK 123
                        78889************************************************98 PP
2HD-ZIP_I/II119.51.8e-3869157189
        HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                        +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++eveeLr+
  Pd.00g1132990.m01  69 RKKLRLTKEQSRLLEESFRQHHTLNPKQKEALAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRA 157
                        69*************************************************************************************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAVFPPTGSS SLELTISVPG FSSYPSLPNS SVRGLDINQV PSIQADQEEW IAAGMEDEED  60
SSNGSGPPRK KLRLTKEQSR LLEESFRQHH TLNPKQKEAL AMQLKLRPRQ VEVWFQNRRA  120
RSKLKQTEME CEYLKRWFGS LTEQNRRLQR EVEELRAMKV GPPTVLSPHS CEPLPASTLT  180
MCPRCERVTT TTTTLDRDRD RSGPTKTNIS SAPATTLSSK VATPAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118126RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.16e-80HD-ZIP family protein