PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1130860.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 646aa MW: 71941.2 Da PI: 6.4742

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1130860.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.6	2.1e-08	481	519	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + Pd.00g1130860.m01 481 MFQNflHPYPKDAEKHVLAVKSGLTRNQVSNWFINARVR 519 5787779******************************88 PP
2	BELL	76.6	3.6e-25	356	424	2	71
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 +qe++ kk+kLl+ll+++d+ Y+q+v++++tv+s+F+a+++ ++ ++++++Al++iS +++L+++i+ + Pd.00g1130860.m01 356 KQEIKTKKSKLLTLLQMLDDCYNQCVDEIHTVVSAFHAATETDP-HIHARFALQTISVLYKNLRERISTH 424 689***************************************.********************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MYNVPTDLTA RNSVVMDGIV PHTTMNSLVQ SYSFDLNHQN HGIALVPALS SFPGEPVVHS 60 HSEFNGTNGA GIVESNPFVT SQRRHNVRDS SFISSSFADN TVFQATPHSA ASLATLLAAR 120 GSLQENLNNL AISGTPVSSS EAYASNDCSN NSNSLFATSV NCGYDEILGS ISSQWEINKY 180 AAPSELGERT SVRTGFQPYS PTGNLDPNGW LSSNGENAMT YHSYSSCKFS NELALTLATS 240 SPAIVGGVDI RNQCSDIGSS GMAHPSLNQT RFGSSEQNSC NSEELSLSFG SYKPPQLSQV 300 ICGSKYLHVV QEILFDIASY SLENLDQSSF SSARIMSENA DSDSRFEVHK EPALHKQEIK 360 TKKSKLLTLL QMLDDCYNQC VDEIHTVVSA FHAATETDPH IHARFALQTI SVLYKNLRER 420 ISTHFLAMTA NSNPASPTES ERSFEIHKQL ALQHLKKKEH QIWRPQRGLP ERSVSVLRAW 480 MFQNFLHPYP KDAEKHVLAV KSGLTRNQVS NWFINARVRL WKPMIEEMYS EMNRRKTRQS 540 DNTERNNRSH HHNIRAMAGL VVVFDFDKTI IDWDSDNWVV EELGVKDLFT QLLPTMPWNS 600 LMDLGDCFSL LDEQTSVLGR AGQNSLSFSS SSRFRNASGS ETCWWL

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MYNVPTDLTA RNSVVMDGIV PHTTMNSLVQ SYSFDLNHQN HGIALVPALS SFPGEPVVHS  60
HSEFNGTNGA GIVESNPFVT SQRRHNVRDS SFISSSFADN TVFQATPHSA ASLATLLAAR  120
GSLQENLNNL AISGTPVSSS EAYASNDCSN NSNSLFATSV NCGYDEILGS ISSQWEINKY  180
AAPSELGERT SVRTGFQPYS PTGNLDPNGW LSSNGENAMT YHSYSSCKFS NELALTLATS  240
SPAIVGGVDI RNQCSDIGSS GMAHPSLNQT RFGSSEQNSC NSEELSLSFG SYKPPQLSQV  300
ICGSKYLHVV QEILFDIASY SLENLDQSSF SSARIMSENA DSDSRFEVHK EPALHKQEIK  360
TKKSKLLTLL QMLDDCYNQC VDEIHTVVSA FHAATETDPH IHARFALQTI SVLYKNLRER  420
ISTHFLAMTA NSNPASPTES ERSFEIHKQL ALQHLKKKEH QIWRPQRGLP ERSVSVLRAW  480
MFQNFLHPYP KDAEKHVLAV KSGLTRNQVS NWFINARVRL WKPMIEEMYS EMNRRKTRQS  540
DNTERNNRSH HHNIRAMAGL VVVFDFDKTI IDWDSDNWVV EELGVKDLFT QLLPTMPWNS  600
LMDLGDCFSL LDEQTSVLGR AGQNSLSFSS SSRFRNASGS ETCWWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	5e-85	TALE family protein