PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1125470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 418aa MW: 47013.8 Da PI: 5.0836

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1125470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.5	1.6e-13	94	156	1	48
TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l+ +++ lG++ +W++Ia+ ++ gRt++++k+ w+++l Pd.00g1125470.m01 94 RGPFTKDEEKLIMQLHGILGNRkfvlfltlllvsktifRWAAIASQLP-GRTDNEIKNLWNTHL 156 89********************************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MSTYSSMDGV LYCKPHFEQL FKESGNFSKN FQPKSAEKQN EQLGSQQTLL HVLWNPRQVC 60 NLLKDSLSTG EGLLRCGKSC RLRWTNYLRP DIKRGPFTKD EEKLIMQLHG ILGNRKFVLF 120 LTLLLVSKTI FRWAAIASQL PGRTDNEIKN LWNTHLKKRL LLMGIDPQTH KPVDSNCLTS 180 TAPASLATRH MAQWESARLE AEARLSRESS LFGQPPEKSE PDYFLRLWNS EVGEAFRNLT 240 TVDKSACPSP ISQASSSTKC GSVSAVTTDV GNTLTGSSTM AGDQNEDMED KICQTNTEDV 300 GHNICQTNTE DVGYKICQTN TEDLEYKSCQ TNTEDMGYKI FQSNTEEVEY KPWRLNTKDV 360 MAGSDSSCSN DLEDSSDTAL QLLLNFPINN DMSFLEDNVD DYATTPARWT PNSFICPL

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MSTYSSMDGV LYCKPHFEQL FKESGNFSKN FQPKSAEKQN EQLGSQQTLL HVLWNPRQVC  60
NLLKDSLSTG EGLLRCGKSC RLRWTNYLRP DIKRGPFTKD EEKLIMQLHG ILGNRKFVLF  120
LTLLLVSKTI FRWAAIASQL PGRTDNEIKN LWNTHLKKRL LLMGIDPQTH KPVDSNCLTS  180
TAPASLATRH MAQWESARLE AEARLSRESS LFGQPPEKSE PDYFLRLWNS EVGEAFRNLT  240
TVDKSACPSP ISQASSSTKC GSVSAVTTDV GNTLTGSSTM AGDQNEDMED KICQTNTEDV  300
GHNICQTNTE DVGYKICQTN TEDLEYKSCQ TNTEDMGYKI FQSNTEEVEY KPWRLNTKDV  360
MAGSDSSCSN DLEDSSDTAL QLLLNFPINN DMSFLEDNVD DYATTPARWT PNSFICPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-81	MYB family protein