PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1117220.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 420aa MW: 47181 Da PI: 4.6983

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1117220.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.6	2.2e-13	163	221	39	99
EETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 39 edesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++gr+W+vk++y+k+ r ++ GW +Fv++n+Lk+ D++vF+l+++ + ++ v +fr+ Pd.00g1117220.m01 163 CNPDGRTWSVKFKYEKSIAR--FQYGWLGFVRDNNLKVDDVCVFSLIEDVKLSFDVVFFRT 221 479*******77777655..99*********************99888888888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MEIELRRCNN GGVWFDKGWP EFSKFCSLDY GSWLVFGYEG NSNFHVLIFD RTATEIEYPK 60 PEMEETDSEE EEEQQDDADD GSVEILDVCE EEEEEEQDDA DDESVEILDV FPPCQRKARE 120 KSPLPCPQPH KKMRTRSSGM MLEESLRNKA SDCSKSEMKR LSCNPDGRTW SVKFKYEKSI 180 ARFQYGWLGF VRDNNLKVDD VCVFSLIEDV KLSFDVVFFR TTEEAANCPL SPGRHDFPTK 240 KGGGGTSSNR TKKGGGGTSS NRTKKGGGGT SSNRTGKATA LDRANAFRSQ NPSSFIVSIR 300 PSYINGRWRL WLPSKFYKLS PSIKHSCEVI LQVSNGRTWS VGLSKGRPRF THGAKCTNDG 360 EQIVPTKEET DNEDVDSSDD SSNDSSDDSG DDLSDDSGDD SVEIMDKFPP PRKTRVVKRS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MEIELRRCNN GGVWFDKGWP EFSKFCSLDY GSWLVFGYEG NSNFHVLIFD RTATEIEYPK  60
PEMEETDSEE EEEQQDDADD GSVEILDVCE EEEEEEQDDA DDESVEILDV FPPCQRKARE  120
KSPLPCPQPH KKMRTRSSGM MLEESLRNKA SDCSKSEMKR LSCNPDGRTW SVKFKYEKSI  180
ARFQYGWLGF VRDNNLKVDD VCVFSLIEDV KLSFDVVFFR TTEEAANCPL SPGRHDFPTK  240
KGGGGTSSNR TKKGGGGTSS NRTKKGGGGT SSNRTGKATA LDRANAFRSQ NPSSFIVSIR  300
PSYINGRWRL WLPSKFYKLS PSIKHSCEVI LQVSNGRTWS VGLSKGRPRF THGAKCTNDG  360
EQIVPTKEET DNEDVDSSDD SSNDSSDDSG DDLSDDSGDD SVEIMDKFPP PRKTRVVKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49475.1	4e-13	B3 family protein