PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1111730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 287aa MW: 32350.1 Da PI: 4.5916 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.1 | 1.2e-19 | 98 | 149 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++++GVr+++ +grW+AeIrdp++ r+r++lg+f+taeeA a+++a+ +++g+ Pd.00g1111730.m01 98 KKFRGVRQRP-WGRWAAEIRDPTS---RTRVWLGTFDTAEEAGLAYDRAAIAFKGH 149 59********.**********965...4**********************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MNRTKYTEHR TVTTKFVKTL NKHSPESNVI APKIIRISFT DGDATDSSGD EAEERIVVKR 60 TINEIRIEEC SASRLFSKPK APRCRANDES NNVSPNGKKF RGVRQRPWGR WAAEIRDPTS 120 RTRVWLGTFD TAEEAGLAYD RAAIAFKGHL AFTNFIKPPE IAVPATPDYD CKPISWETSP 180 NVAVIGECDH SLRSPTSVLS PGEAEIEWRP VGISERDDFG AFESEFLLND CFEPEAPAPI 240 FFDEMRVVPE MLLKDEDFSD LSLDFRSCKW DDVEDYFEGA CDESGAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-46 | ERF family protein |