PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g110590.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 482aa MW: 52757.7 Da PI: 6.5238

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g110590.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.4e-17	52	96	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ Pd.00g110590.m02 52 RERWTEEEHKKFLEALKLYGRA-WRKIEEHVG-TKTAVQIRSHAQKF 96 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDQYDGSRSE SVLSANNGVS FSVSGLQLKD QFSNGNDSAP KARKPYTITK QRERWTEEEH 60 KKFLEALKLY GRAWRKIEEH VGTKTAVQIR SHAQKFFSKV ARDSNGSNVI SEEPIDIPPP 120 RPKRKPMRPY PRKLVHPVNK ETFIVERPTR SASPNLSVSE PENQSPTSVL SVIGSDTLGS 180 ADSNTPSRSL SPVSSAADVH GVDLNLSEPP NPSLEESGST SPAVAENGSL PNMQLSMKLE 240 LFPVDNVDAS GVSAEEVSAR SLKLFGRTVL VTDSHRPSSP TVGTSKSLPS DVKEEKPVQT 300 STPCNFTATE SASGSVEHVW DNFPYGVHPG MYFMQFQNQN SNLVESGSAY PVPWWSLCPK 360 LPFPFIPFHK PQAVKEHFDG NLGDPKEVEK EGSWTGSDAG SVNDEENGDK CLGIETEGKE 420 QEPNLVLQFK ASANSAFSEL RAGPSPGKCR KGFVPYKRCL AERDTSTIAS EDRDGKRVRL 480 SL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDQYDGSRSE SVLSANNGVS FSVSGLQLKD QFSNGNDSAP KARKPYTITK QRERWTEEEH  60
KKFLEALKLY GRAWRKIEEH VGTKTAVQIR SHAQKFFSKV ARDSNGSNVI SEEPIDIPPP  120
RPKRKPMRPY PRKLVHPVNK ETFIVERPTR SASPNLSVSE PENQSPTSVL SVIGSDTLGS  180
ADSNTPSRSL SPVSSAADVH GVDLNLSEPP NPSLEESGST SPAVAENGSL PNMQLSMKLE  240
LFPVDNVDAS GVSAEEVSAR SLKLFGRTVL VTDSHRPSSP TVGTSKSLPS DVKEEKPVQT  300
STPCNFTATE SASGSVEHVW DNFPYGVHPG MYFMQFQNQN SNLVESGSAY PVPWWSLCPK  360
LPFPFIPFHK PQAVKEHFDG NLGDPKEVEK EGSWTGSDAG SVNDEENGDK CLGIETEGKE  420
QEPNLVLQFK ASANSAFSEL RAGPSPGKCR KGFVPYKRCL AERDTSTIAS EDRDGKRVRL  480
SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	7e-69	MYB_related family protein