PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g110590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 496aa MW: 54100.3 Da PI: 6.3681 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.7e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ Pd.00g110590.m01 66 RERWTEEEHKKFLEALKLYGRA-WRKIEEHVG-TKTAVQIRSHAQKF 110 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MVGGLMLSPD MAAAQDQYDG SRSESVLSAN NGVSFSVSGL QLKDQFSNGN DSAPKARKPY 60 TITKQRERWT EEEHKKFLEA LKLYGRAWRK IEEHVGTKTA VQIRSHAQKF FSKVARDSNG 120 SNVISEEPID IPPPRPKRKP MRPYPRKLVH PVNKETFIVE RPTRSASPNL SVSEPENQSP 180 TSVLSVIGSD TLGSADSNTP SRSLSPVSSA ADVHGVDLNL SEPPNPSLEE SGSTSPAVAE 240 NGSLPNMQLS MKLELFPVDN VDASGVSAEE VSARSLKLFG RTVLVTDSHR PSSPTVGTSK 300 SLPSDVKEEK PVQTSTPCNF TATESASGSV EHVWDNFPYG VHPGMYFMQF QNQNSNLVES 360 GSAYPVPWWS LCPKLPFPFI PFHKPQAVKE HFDGNLGDPK EVEKEGSWTG SDAGSVNDEE 420 NGDKCLGIET EGKEQEPNLV LQFKASANSA FSELRAGPSP GKCRKGFVPY KRCLAERDTS 480 TIASEDRDGK RVRLSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 9e-69 | MYB_related family protein |