PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1105610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 677aa    MW: 76283.2 Da    PI: 5.2892
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1105610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS290.16.1e-893126752374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         + Ll++Ae v  +++e+a++lL r + +a  +g+p+qR+++yf+eAL++r+ r++ ++ ++ +  + s  +  ++   + ++++  P++ +
  Pd.00g1105610.m01 312 AHILLAAAEKVGYQQFERANRLLLRCEWIAYFKGNPVQRVVFYFAEALRERIERETGSIPSKAKEMSISG-HGLSTNPTYIAYHQEVPFHSV 402
                        699***************************************************6666666555555543.3444445556799999***** PP

               GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                         ++t  qaI e+v+ e++vH iD++i  G+QW  L+++La+R+e p   l iT+vg+     k+++eetg+rL+++Ae+l++pf+f++++ +
  Pd.00g1105610.m01 403 MQFTGIQAIIESVSLESKVHLIDLEIRSGVQWTGLMESLAEREECPVeLLTITAVGE---AGKQKIEETGKRLTSVAESLNIPFQFKAVIIS 491
                        *******************************************7666489*******...589***************************** PP

               GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ++ed++ + ++v+ +Ea+aV   l l ++ +++ +le+    +++++++l P ++vv+e ea+hns+sF++rf++al yysa+fd+le+ + 
  Pd.00g1105610.m01 492 AMEDIKDQLFDVEDDEAVAVYAPLILRTMISRPSCLEN----LMRVMRNLTPCIMVVIEVEANHNSPSFVNRFIDALFYYSAFFDCLETCV- 578
                        ******************************88888888....************************************************7. PP

               GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                        +++e r+ +E   +++ i+n+va+eg+er++r  ++  Wr+ + ++G+ ++++s+    qa+l+ ++++    +++ + ++l+ gWk+ p+ 
  Pd.00g1105610.m01 579 KQEEYRVLMEDL-FREGIRNIVAAEGSERVARSVKMDVWRAFFARFGMVEMNFSNASLYQASLVAKRFGCPSCTLDRNGKCLIVGWKGTPIH 669
                        556667777766.********************************************************999******************** PP

               GRAS 369 svSaWr 374
                        svSaW+
  Pd.00g1105610.m01 670 SVSAWK 675
                        *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 677 aa     Download sequence    
MLHWCRVVVK PVVDDTVFGA ARGEKWVERV AVAASFGCIW WWRLRDEVES LVVVAKAKRE  60
LSMGIGVADF VGWWLYYLTV TIGMVRVVKG VMWLSMVLLC RRRSGGGNFA NSCAEDRDLQ  120
DNKNMANAFF PFTPFDFGVL GGLTPQLEDY EKDQEVAFKV KRGHLFAIEE LGLGEMDSAL  180
SSEHGFYQED TQPIQDGTHQ FTYNQIGGSD IAETNKDLPH QSSLAVLELL NSYGSAFKKL  240
RGERTSSNTG NEAEASSYVG QQKLSTEEIM RVAGARYVQF SNQGYGDFYP LHPFGYALSG  300
LSEEETKDAE LAHILLAAAE KVGYQQFERA NRLLLRCEWI AYFKGNPVQR VVFYFAEALR  360
ERIERETGSI PSKAKEMSIS GHGLSTNPTY IAYHQEVPFH SVMQFTGIQA IIESVSLESK  420
VHLIDLEIRS GVQWTGLMES LAEREECPVE LLTITAVGEA GKQKIEETGK RLTSVAESLN  480
IPFQFKAVII SAMEDIKDQL FDVEDDEAVA VYAPLILRTM ISRPSCLENL MRVMRNLTPC  540
IMVVIEVEAN HNSPSFVNRF IDALFYYSAF FDCLETCVKQ EEYRVLMEDL FREGIRNIVA  600
AEGSERVARS VKMDVWRAFF ARFGMVEMNF SNASLYQASL VAKRFGCPSC TLDRNGKCLI  660
VGWKGTPIHS VSAWKFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-51GRAS family protein