PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1086880.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 844aa MW: 94207 Da PI: 6.5535

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1086880.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.2	2.9e-08	486	524	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + Pd.00g1086880.m01 486 MFQNflHPYPKDAEKHVLAVKSGLTRNQVSNWFINARVR 524 5887779******************************88 PP
2	BELL	76.7	3.6e-25	360	429	1	71
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 ++qe++ kk+kLl+ll+++d+ Y+q+v++++tv+s+F+a+++ ++ ++++++Al++iS +++L+++i+ + Pd.00g1086880.m01 360 QKQEIKTKKSKLLTLLQMLDDCYNQCVDEIHTVVSAFHAATETDP-HIHARFALQTISVLYKNLRERISTH 429 579****************************************.********************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 844 aa Download sequence
MMDNQMYNVP TDLTARNSVV MDGIVPHTTM NSLVQSYSFD LNHQNHGMAL VPALSSFPGE 60 PVVHSHSEFN GTNGAGIVES NPFVTSQRRH NVRDSSFISS SFADNTVFQA TPHSAASLAT 120 LLAARGSLQE NLNNLAISGT PVSSSEAYAS NDCSNNSNSL FATSVNCGYD EILGSISSQW 180 EINKYAAPSE LGERTSVRTG FQPYSPTGNL DPNGWLSSNG ENAMTYHSYS SCKFSNELAL 240 TLATSSPAIV GGVDIRNQCS DIGSSGMAHP SLNQTRFGSS EQNSCNSEEL SLSFGSYKPP 300 QLSQVICGSK YLHVVQEILF DIASYSLENL DQSSFSSARI MSENADSDSR FEVHKEPALQ 360 KQEIKTKKSK LLTLLQMLDD CYNQCVDEIH TVVSAFHAAT ETDPHIHARF ALQTISVLYK 420 NLRERISTHF LAMTANSNPA SPTESERSFE IHKQLALQHL KKKEHQIWRP QRGLPERSVS 480 VLRAWMFQNF LHPYPKDAEK HVLAVKSGLT RNQVSNWFIN ARVRLWKPMI EEMYSEMNRR 540 KTRQSDNTER NNRSHHHNIR AMAGLVVVFD FDKTIIDWDS DNWVVEELGV KDLFTQLLPT 600 MPWNSLMDTM MRELHSRGKT IEDIAECLKK IPLHPRIASA IKSAHAFGCD LRVLSAANEF 660 FIDTILKHHG LMDCFSEINT NPSIIDEQGR LRILPYHDFH SSSHGCTICP PSMCKGLIME 720 KIQSSVAADG KKHKQFIYVG DGAPDFCAGL KLEEGDFLMP RRDFPIWDLI SANPLFTKAK 780 IYEWNECDEL GAVLLNTVNA FFTANKSRST DQLVPVDCKS QNSSTCFTAH EAFQNALPVP 840 LPRQ

Sequence ? help Back to Top

Protein Sequence Length: 844 aa Download sequence

MMDNQMYNVP TDLTARNSVV MDGIVPHTTM NSLVQSYSFD LNHQNHGMAL VPALSSFPGE  60
PVVHSHSEFN GTNGAGIVES NPFVTSQRRH NVRDSSFISS SFADNTVFQA TPHSAASLAT  120
LLAARGSLQE NLNNLAISGT PVSSSEAYAS NDCSNNSNSL FATSVNCGYD EILGSISSQW  180
EINKYAAPSE LGERTSVRTG FQPYSPTGNL DPNGWLSSNG ENAMTYHSYS SCKFSNELAL  240
TLATSSPAIV GGVDIRNQCS DIGSSGMAHP SLNQTRFGSS EQNSCNSEEL SLSFGSYKPP  300
QLSQVICGSK YLHVVQEILF DIASYSLENL DQSSFSSARI MSENADSDSR FEVHKEPALQ  360
KQEIKTKKSK LLTLLQMLDD CYNQCVDEIH TVVSAFHAAT ETDPHIHARF ALQTISVLYK  420
NLRERISTHF LAMTANSNPA SPTESERSFE IHKQLALQHL KKKEHQIWRP QRGLPERSVS  480
VLRAWMFQNF LHPYPKDAEK HVLAVKSGLT RNQVSNWFIN ARVRLWKPMI EEMYSEMNRR  540
KTRQSDNTER NNRSHHHNIR AMAGLVVVFD FDKTIIDWDS DNWVVEELGV KDLFTQLLPT  600
MPWNSLMDTM MRELHSRGKT IEDIAECLKK IPLHPRIASA IKSAHAFGCD LRVLSAANEF  660
FIDTILKHHG LMDCFSEINT NPSIIDEQGR LRILPYHDFH SSSHGCTICP PSMCKGLIME  720
KIQSSVAADG KKHKQFIYVG DGAPDFCAGL KLEEGDFLMP RRDFPIWDLI SANPLFTKAK  780
IYEWNECDEL GAVLLNTVNA FFTANKSRST DQLVPVDCKS QNSSTCFTAH EAFQNALPVP  840
LPRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	6e-84	TALE family protein