PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1085870.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 382aa MW: 42260.5 Da PI: 4.9817 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.7 | 2.7e-10 | 307 | 347 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Pd.00g1085870.m01 307 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 347 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 382 aa Download sequence |
MESVGVFADG EWESLSRLFS TEEIEFTPHF LSQGSFPFQH NEGMNFEIPA SFCPNIPEAE 60 MGLSRVNESF FQHPSDALNS NVHYLSQESC YGNNNHGSAG IFTAILNQEN YYFGNSCHVP 120 VANDISASMD VYMNHHDHDG KSFGSFIPTF SDIVMEGSVS NKEDSGSDRL GFSDDSQPAA 180 IAIPGEELHL KRVHDVAEDK SNNDKSDSNP KKKPCLSKDV QKTKKNNARS KKGQKANSDV 240 KVKDEEESNT GADRQSTSSC SSEDDNGSQE TNGGETSDLK TSSALNSNGK TRANRGSATD 300 PQSLYARKRR ERINERLRIL QNLVPNGTKV DISTMLEEAV HYVKFLQLQI KLLSSDDMWM 360 YAPIAYNGMD IGLSLQKMSP LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33880.1 | 4e-48 | bHLH family protein |