PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1081020.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 783aa MW: 85579.5 Da PI: 4.6608

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1081020.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.9	1.3e-09	733	781	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l +v+++G g+Wk I + + Rt+ ++k++w++ Pd.00g1081020.m01 733 KRWSLLEEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 781 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MDSDVDVSRW VLELLIRDRE TECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT 60 ETMLETLEMI EDLDLSQGIA TTDSMKAAYL AVATECTVKF LAGLMGKPSG KYLEAVDRIW 120 RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA 180 LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKEANVGGG PEAEAQIKNG ANVGDRSELE 240 AQTENGANAG DGSELEAQMA NAADVGGESE LEAQMENGAN VGGESELEAQ MENGDNVQMA 300 SGTNAVDGSE LEKEVVNETN AGDGSQLEVQ GVNEANGSCG FESGPQPMTG VQLREVGARR 360 MPPTMSRDLV LNEMDSGFTN RDVLRFGDDQ VHETGVGLPS TNRELVFSLD PTTKDKEIQR 420 STGLRYKHLA HRRTRGPVRI RDAEDLGRDL SNSKYDSLST PEVSNAQEAL RSSILELQAV 480 VTDPLPDALR VAETIRLDLA MKSVNVGAEN LSVEKGAGPV LSHNDNLGNM SVPQSSGKEK 540 DVPTPPVNQG KGTESVQTDD ANLGNPSSSN KNNAPRPMTD PLPDALRVAE TIRLDLAMKS 600 VNVGAENLSV EIGARPVQSH NDNLGNVSIP QSSGKEKDVP NPPVNQGKGT ESVQTDDVNL 660 GNPSSSNKNN APRPSLMERN TTAHTYEWDD SIDTSQGAMK DPGRLRLPSP KRNAVSPLKK 720 YENKRFTKRR KAKRWSLLEE DTLRTGVQKY GAGNWKFILN SYREIFEERT EVDLKDKWRN 780 MTR

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MDSDVDVSRW VLELLIRDRE TECIAKRVLA VAPFSDQDYR LKKTVLLRTI ECDVYDALVT  60
ETMLETLEMI EDLDLSQGIA TTDSMKAAYL AVATECTVKF LAGLMGKPSG KYLEAVDRIW  120
RGRVGALERS ETSQLISAEL RQRMDEVEAG VWDLRVSKKL SRMNTRNDAL RLVAVYVKEA  180
LALMGPPFIT WAVRLNVPKE VADLEGDQIA VAKEANVGGG PEAEAQIKNG ANVGDRSELE  240
AQTENGANAG DGSELEAQMA NAADVGGESE LEAQMENGAN VGGESELEAQ MENGDNVQMA  300
SGTNAVDGSE LEKEVVNETN AGDGSQLEVQ GVNEANGSCG FESGPQPMTG VQLREVGARR  360
MPPTMSRDLV LNEMDSGFTN RDVLRFGDDQ VHETGVGLPS TNRELVFSLD PTTKDKEIQR  420
STGLRYKHLA HRRTRGPVRI RDAEDLGRDL SNSKYDSLST PEVSNAQEAL RSSILELQAV  480
VTDPLPDALR VAETIRLDLA MKSVNVGAEN LSVEKGAGPV LSHNDNLGNM SVPQSSGKEK  540
DVPTPPVNQG KGTESVQTDD ANLGNPSSSN KNNAPRPMTD PLPDALRVAE TIRLDLAMKS  600
VNVGAENLSV EIGARPVQSH NDNLGNVSIP QSSGKEKDVP NPPVNQGKGT ESVQTDDVNL  660
GNPSSSNKNN APRPSLMERN TTAHTYEWDD SIDTSQGAMK DPGRLRLPSP KRNAVSPLKK  720
YENKRFTKRR KAKRWSLLEE DTLRTGVQKY GAGNWKFILN SYREIFEERT EVDLKDKWRN  780
MTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	1e-18	MYB_related family protein