PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1078780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 602aa MW: 67029.3 Da PI: 9.5362

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1078780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.4	1.7e-13	349	401	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrdp + r r+++g + t eeAa a+++a ++++g Pd.00g1078780.m01 349 RYRGVRQRR-SGKFTAEIRDPA--KkvSRNRVWVGCYETSEEAALAYDRASLRIHG 401 7***999.7*****84..34335**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MNTTVQPQTQ HPSSHAVTGN HLYPQPHLHQ PVQSGTPQQR TMDMQSHGVP HSQSQTPVQI 60 QSQSPQQPPV MRLPQSHIPN QQQPALLPSP GQIRNINPAQ QQPVHSYAQQ PGNTVQQRPL 120 MRAVQRLIPR QYLRHQPYVQ QQPPTQLHPR GQSHSFPLHV HAYTESQRNI ALSQGIQLSQ 180 SNLGGSRRPM MPIHGVQSQT SVQTAGGLHM RPVHPTVHLP STNQSNMVRT KNLVQSGANW 240 RPTTSERHAE QESESSAEQI AKNVTHDVGT ASAVVGDAEV KTVKSEMDMK SIDNENKPTG 300 EDKTNHGDTS SKEIPDIHAL ENGESVSQSM LNAADQNKVR KLGVARGRRY RGVRQRRSGK 360 FTAEIRDPAK KVSRNRVWVG CYETSEEAAL AYDRASLRIH GSKAVLNFPI CHIRDCLERA 420 STCPNHRQAQ RTGERGCHSF NNAEIHCTLL IAADPLFPRT GKTDLYESPF LSKLGVVDPK 480 ATEERTFNVG VDEVVNLLMC SLVPKTPFTD MLLKPKPEAQ LINEFFDQRI SIISQVAEYT 540 MRGDPNISFT LTIGDRSSWK GCIDNLYKSV EDIDGQHLMS TSHRTILLSP KPAPGFSYAN 600 HP

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MNTTVQPQTQ HPSSHAVTGN HLYPQPHLHQ PVQSGTPQQR TMDMQSHGVP HSQSQTPVQI  60
QSQSPQQPPV MRLPQSHIPN QQQPALLPSP GQIRNINPAQ QQPVHSYAQQ PGNTVQQRPL  120
MRAVQRLIPR QYLRHQPYVQ QQPPTQLHPR GQSHSFPLHV HAYTESQRNI ALSQGIQLSQ  180
SNLGGSRRPM MPIHGVQSQT SVQTAGGLHM RPVHPTVHLP STNQSNMVRT KNLVQSGANW  240
RPTTSERHAE QESESSAEQI AKNVTHDVGT ASAVVGDAEV KTVKSEMDMK SIDNENKPTG  300
EDKTNHGDTS SKEIPDIHAL ENGESVSQSM LNAADQNKVR KLGVARGRRY RGVRQRRSGK  360
FTAEIRDPAK KVSRNRVWVG CYETSEEAAL AYDRASLRIH GSKAVLNFPI CHIRDCLERA  420
STCPNHRQAQ RTGERGCHSF NNAEIHCTLL IAADPLFPRT GKTDLYESPF LSKLGVVDPK  480
ATEERTFNVG VDEVVNLLMC SLVPKTPFTD MLLKPKPEAQ LINEFFDQRI SIISQVAEYT  540
MRGDPNISFT LTIGDRSSWK GCIDNLYKSV EDIDGQHLMS TSHRTILLSP KPAPGFSYAN  600
HP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17500.1	4e-16	ERF family protein