PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g107860.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 890aa MW: 97949.9 Da PI: 5.7131

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g107860.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.9	2.3e-29	599	650	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Pd.00g107860.m01 599 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 650 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence
MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA 60 AMDQISASFG VPSCPSVAYA PLDALNFAEQ NGEALPGTEG GETFNVGESS FSCEDKIVFQ 120 QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPGLSLN EKMLKALSLF 180 KESSSGGILA QLWVPVKYGD HYLLSTCEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG 240 LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV 300 STKEKPNFDT EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI 360 LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR TMQGFVHACV 420 EHHLEVGEGI AGKALQSNHT FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGD 480 DDYILEFFLP VNVKGSSEQQ LLLNNLSGTM QKMCKSLRTV SDAELAGVQG SDTGFQKGPT 540 PNSPQQRNSQ TASSDSEFNS IENMPSDVFN RRNGGIEAEN PHEQAPGSRR QMEKKRSTAE 600 KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV 660 LDSVQGVEGG LKYDPTTGGF VATGSIIQDF DAQKSRLFPE KSLPVQHSEL VTQDPVPVPS 720 VSCNNGENVA IKLEEDGCCI PTSHEEGVKK QNIPLMPQRD SKPIAMEGNK WGHSKNSLKL 780 ENSDCHFVSQ SSSSLAAADD MDTGVDGDDG IVEYNQHTSS SMTDSTNCSG STLRSSSSQS 840 FEEQKQPNMN ASSVENGSKI TVKATYKEDT IRFKFDPSVA FNCMKRLQRG

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence

MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA  60
AMDQISASFG VPSCPSVAYA PLDALNFAEQ NGEALPGTEG GETFNVGESS FSCEDKIVFQ  120
QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPGLSLN EKMLKALSLF  180
KESSSGGILA QLWVPVKYGD HYLLSTCEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG  240
LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV  300
STKEKPNFDT EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI  360
LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR TMQGFVHACV  420
EHHLEVGEGI AGKALQSNHT FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGD  480
DDYILEFFLP VNVKGSSEQQ LLLNNLSGTM QKMCKSLRTV SDAELAGVQG SDTGFQKGPT  540
PNSPQQRNSQ TASSDSEFNS IENMPSDVFN RRNGGIEAEN PHEQAPGSRR QMEKKRSTAE  600
KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV  660
LDSVQGVEGG LKYDPTTGGF VATGSIIQDF DAQKSRLFPE KSLPVQHSEL VTQDPVPVPS  720
VSCNNGENVA IKLEEDGCCI PTSHEEGVKK QNIPLMPQRD SKPIAMEGNK WGHSKNSLKL  780
ENSDCHFVSQ SSSSLAAADD MDTGVDGDDG IVEYNQHTSS SMTDSTNCSG STLRSSSSQS  840
FEEQKQPNMN ASSVENGSKI TVKATYKEDT IRFKFDPSVA FNCMKRLQRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein