PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077920.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 691aa    MW: 78344.5 Da    PI: 5.0466
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077920.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.23.1e-1103276893374
               GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d + a++ L ++++++sp+gd +qRla+y++++L+ rla         l+p    e++ ++ l a++++  ++P+ k+s
  Pd.00g1077920.m02 327 TLLTQCAQAVASYDIRTANEQLRQIRQHSSPYGDGTQRLAHYLANGLELRLAA-----GVPLNP----EMSAADLLRAYQTYITACPFQKMS 409
                        69**************************************************9.....222333....34579******************* PP

               GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++ aN++I + +e+++r+HiiDf++ +G QWp+L+q L++R +gpp+lRiTgv+ p++g   +e++e+tg+rLa+++e+++vpfe+nv +ak
  Pd.00g1077920.m02 410 NFYANRTIAKLAEKATRLHIIDFGVLYGYQWPCLIQCLSNRHGGPPTLRITGVEFPQPGfrPSERVEATGRRLANYCERFKVPFEYNV-IAK 500
                        **********************************************************9****************************9.7** PP

               GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ++e++++e+++++++E ++Vn+ ++l++l+de+v+ +  rd+vLkl+++++P+++++   + ++n++ F +rf eal ++s+lfd++e++lp
  Pd.00g1077920.m02 501 NWETIQYEDIKIDRDELIVVNCLYRLKNLPDETVTDSP-RDTVLKLIRRINPDIFIHGVVNGSYNAPFFDTRFREALFHFSSLFDMFEETLP 591
                        ******************************99888777.***************************************************** PP

               GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                        re+++r   E+e+ gr++ nv+aceg++r+er et+++W+ r ++aGF+++pl++++ k++++++   + + + v+e+  ++++gWk+r + 
  Pd.00g1077920.m02 592 REDQQRLLFEKEVYGRDVINVIACEGSRRFERPETYKQWQFRNKRAGFRQLPLDQEILKKVRSMVTSEYHKDFVVDEDGMWVLQGWKGRIIH 683
                        *****************************************************************9999888******************** PP

               GRAS 369 svSaWr 374
                        ++S W+
  Pd.00g1077920.m02 684 AISYWK 689
                        *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
MDTFLDEIPS SMNKFMFDQG SVPAYSNQNI GTEFEADHDF TDPSFFLVNP DPSSDFSSLS  60
GFSSEVDSPD SQSSNAILKY ISEMLMEEEL ENKPCMLQDC LALQAAEKSL HDVLVQDYPS  120
SANSLLTSVY QNVENPDEGS NHSSNGSVAA SNWVGSDWDC VQDVFQSSHI QISATESPAY  180
TLSVPNPLLS NGQGEIIAVE SSSSFPIEPR ELAKDVSFNS VQDGSSSPRG SRSKKNRQRE  240
DGDDPDEGRS NKQSAVYADE SELPELFDKV LLRQGEKQES QSCSPQESEH KEGSGKLQLN  300
RKSRGSKGKK TRKKKPDDNT GGVDLWTLLT QCAQAVASYD IRTANEQLRQ IRQHSSPYGD  360
GTQRLAHYLA NGLELRLAAG VPLNPEMSAA DLLRAYQTYI TACPFQKMSN FYANRTIAKL  420
AEKATRLHII DFGVLYGYQW PCLIQCLSNR HGGPPTLRIT GVEFPQPGFR PSERVEATGR  480
RLANYCERFK VPFEYNVIAK NWETIQYEDI KIDRDELIVV NCLYRLKNLP DETVTDSPRD  540
TVLKLIRRIN PDIFIHGVVN GSYNAPFFDT RFREALFHFS SLFDMFEETL PREDQQRLLF  600
EKEVYGRDVI NVIACEGSRR FERPETYKQW QFRNKRAGFR QLPLDQEILK KVRSMVTSEY  660
HKDFVVDEDG MWVLQGWKGR IIHAISYWKP V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301316RKSRGSKGKKTRKKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-176GRAS family protein