PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1077830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 713aa MW: 78722.9 Da PI: 9.0661

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1077830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	615	664	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pd.00g1077830.m01 615 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 664 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MVGGFQRVLA IRGREKDEFE LLAKNRCAEE FLFLDSESWQ LKRLDYGFNG YQVPATPRAT 60 RSARRRGAIR KRVDDNSMGA FDLLATIAGK LLLEGESSPA SSHTSKDQCA GTKENCLDGD 120 KPLKVEPCDQ GSCDRRIPVS DHISQGPNQS SCSKESPVHQ NESSVMTTSN CSERFASDML 180 VSGKCKNETG SFTSKIEAGS SGCREAGEFK LDGEVKTLIK DETNKSAKVL IGTGPDMCGL 240 EDPVVWEGEP PALVSSDSST KVPMYVDHIP QRSFPTSRDD VKVVSRDDDE NSSGCTHPVT 300 SIKYSRPAPS RIGDRRIRKI LASKYWKVAP KLKDDIHSNS YRDQKPNYHN RKNCYKRQRS 360 QMNIPFKKRK LFDRSAVLNI DEGIRREGFF DSRGKGITGD ASCSKMQGAA MKSSSLAGQH 420 SSFQSRSSHV KLRIKSFRVP ELFIEIPDTA TVGSLKKTVM DAVTAVLGGG VCVGVLLQGK 480 KVRDDNKTLL QTGISQDNQL DSLGFTLEPN SSQTPPPLCS GDSPHMLPCD VLQPLTRYPS 540 GPTSEASPEP HTASLGNFIE SDHDSAPSPT DMSAEKSTTD SKALVAVPDM SVEALAVVPG 600 HRKSKRFDIG QRRIRRPFSV AEVEALVQAV EKLGTGRWRD VKLRAFDNAK HRTYVDLKDK 660 WKTLVHTARI SPQQRRGEPV PQELLDRVLT AHAYWSQQQA KQQLKQPETC LLV

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MVGGFQRVLA IRGREKDEFE LLAKNRCAEE FLFLDSESWQ LKRLDYGFNG YQVPATPRAT  60
RSARRRGAIR KRVDDNSMGA FDLLATIAGK LLLEGESSPA SSHTSKDQCA GTKENCLDGD  120
KPLKVEPCDQ GSCDRRIPVS DHISQGPNQS SCSKESPVHQ NESSVMTTSN CSERFASDML  180
VSGKCKNETG SFTSKIEAGS SGCREAGEFK LDGEVKTLIK DETNKSAKVL IGTGPDMCGL  240
EDPVVWEGEP PALVSSDSST KVPMYVDHIP QRSFPTSRDD VKVVSRDDDE NSSGCTHPVT  300
SIKYSRPAPS RIGDRRIRKI LASKYWKVAP KLKDDIHSNS YRDQKPNYHN RKNCYKRQRS  360
QMNIPFKKRK LFDRSAVLNI DEGIRREGFF DSRGKGITGD ASCSKMQGAA MKSSSLAGQH  420
SSFQSRSSHV KLRIKSFRVP ELFIEIPDTA TVGSLKKTVM DAVTAVLGGG VCVGVLLQGK  480
KVRDDNKTLL QTGISQDNQL DSLGFTLEPN SSQTPPPLCS GDSPHMLPCD VLQPLTRYPS  540
GPTSEASPEP HTASLGNFIE SDHDSAPSPT DMSAEKSTTD SKALVAVPDM SVEALAVVPG  600
HRKSKRFDIG QRRIRRPFSV AEVEALVQAV EKLGTGRWRD VKLRAFDNAK HRTYVDLKDK  660
WKTLVHTARI SPQQRRGEPV PQELLDRVLT AHAYWSQQQA KQQLKQPETC LLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-115	MYB_related family protein