PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1074210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1027aa MW: 111857 Da PI: 4.7817

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1074210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.4	1.8e-09	977	1025	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l +v+++G g+Wk I + + Rt+ ++k++w++ Pd.00g1074210.m01 977 KRWSLLEEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 1025 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 1027 aa Download sequence
MRRAERFGIS VQMTEEEKRN SRAERVSVAS FMDSDVDVSR WVLELLIRDR EKECIAKRVL 60 AVAPFSDQDY RLKKTVLLRT IECDVYDALV TETMLETLEM IEDLDLSQGI ATTDSMKAAY 120 LAVATECTVK FLAGLMGKPS GKYLEAVDRI WRGRVGALER SETSQLISAE LRQRMDEVEA 180 GVWDLRVSKK LSRMNTRNDA LRLVAVYVKE ALALMGPPFI TWAVRLNVPK EVADLEGDQI 240 AVAKEANVGG GPEAEAQIKN GANVGDRSEL EVQTENGANA GDGSELEAQM ANAADVGGES 300 ELEAQMDNGA NVGGESELEA QMENGDNVQM ASGTNAVDGS ELEKEVVNET NAGDGSQLGV 360 QTTNGTNAAG ESVLEAQLVN GTNLGDGCEL QVQGVNEANG SCGFESGPQP MTGVQLREVG 420 ARRMPPTMSR DLVLNEMDSG FTNREVLRFG DDQVRETGVG LPSTNRELVF SLDPTAKDKE 480 IQRSTGLRYK HLAHRRTRGP VRIRDTEDLG RDLSNSKYDS LSTPEVSNAQ EALRSSILEL 540 QAVVTDPLPD ALRVAETIRL DLAMKSVNVG AENLSVEKGA GPVQSHNDNL GNMSVPQSSG 600 KEKDVPTPPV NQGKGTESVQ TDDANLGNPS SSNENNAPRP MTDPLPDALR VAETIRLDLA 660 MKSRSTGLRY KHLAHRRTRG PVRIRDAEDL GRDLSNSKYD SLSTPEVSNA QEALRSSILE 720 LQAVVTDPLP DALRVAETIR LDLAMKSVNV GAENLSVEKG AGPVLSHNDN LGNMSVPQSS 780 GKEKDVPTPP VNQGKGTESV QTDDANLGNP SSSNKNNAPR PMTDPLPDAL RVAETIRLDL 840 AMKSVNVGAE NLSVEIGARP VQSHNDNLGN VSIPQSSGKE KDVPNPPVNQ GKGTESVQTD 900 DVNLGNPSSS NKNNAPRPSL MERNTTAHTY EWDDSIDTSQ GAMKDPGRLH LPSPKRNAVS 960 PLKKYENKRF TKRRKAKRWS LLEEDTLRTG VQKYGAGNWK FILNSYREIF EERTEVDLKD 1020 KWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 1027 aa Download sequence

MRRAERFGIS VQMTEEEKRN SRAERVSVAS FMDSDVDVSR WVLELLIRDR EKECIAKRVL  60
AVAPFSDQDY RLKKTVLLRT IECDVYDALV TETMLETLEM IEDLDLSQGI ATTDSMKAAY  120
LAVATECTVK FLAGLMGKPS GKYLEAVDRI WRGRVGALER SETSQLISAE LRQRMDEVEA  180
GVWDLRVSKK LSRMNTRNDA LRLVAVYVKE ALALMGPPFI TWAVRLNVPK EVADLEGDQI  240
AVAKEANVGG GPEAEAQIKN GANVGDRSEL EVQTENGANA GDGSELEAQM ANAADVGGES  300
ELEAQMDNGA NVGGESELEA QMENGDNVQM ASGTNAVDGS ELEKEVVNET NAGDGSQLGV  360
QTTNGTNAAG ESVLEAQLVN GTNLGDGCEL QVQGVNEANG SCGFESGPQP MTGVQLREVG  420
ARRMPPTMSR DLVLNEMDSG FTNREVLRFG DDQVRETGVG LPSTNRELVF SLDPTAKDKE  480
IQRSTGLRYK HLAHRRTRGP VRIRDTEDLG RDLSNSKYDS LSTPEVSNAQ EALRSSILEL  540
QAVVTDPLPD ALRVAETIRL DLAMKSVNVG AENLSVEKGA GPVQSHNDNL GNMSVPQSSG  600
KEKDVPTPPV NQGKGTESVQ TDDANLGNPS SSNENNAPRP MTDPLPDALR VAETIRLDLA  660
MKSRSTGLRY KHLAHRRTRG PVRIRDAEDL GRDLSNSKYD SLSTPEVSNA QEALRSSILE  720
LQAVVTDPLP DALRVAETIR LDLAMKSVNV GAENLSVEKG AGPVLSHNDN LGNMSVPQSS  780
GKEKDVPTPP VNQGKGTESV QTDDANLGNP SSSNKNNAPR PMTDPLPDAL RVAETIRLDL  840
AMKSVNVGAE NLSVEIGARP VQSHNDNLGN VSIPQSSGKE KDVPNPPVNQ GKGTESVQTD  900
DVNLGNPSSS NKNNAPRPSL MERNTTAHTY EWDDSIDTSQ GAMKDPGRLH LPSPKRNAVS  960
PLKKYENKRF TKRRKAKRWS LLEEDTLRTG VQKYGAGNWK FILNSYREIF EERTEVDLKD  1020
KWRNMTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	1e-18	MYB_related family protein