PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1069790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 310aa    MW: 35180.9 Da    PI: 4.4431
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1069790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65e-1973127357
                        --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
           Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                        k++++t +q++ Le+ Fe ++++  e++++LAk+lgL+ rqV +WFqNrRa+ k+
  Pd.00g1069790.m01  73 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKN 127
                        56689***********************************************995 PP
2HD-ZIP_I/II126.11.5e-4073164293
        HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                        kkrrl+ +qv++LE++Fe e+kLeperK++la+eLglqprqva+WFqnrRAR+k+kqlEk+y++Lk ++d+lk+++++L ke+ +L++e+++
  Pd.00g1069790.m01  73 KKRRLTVDQVQFLEKNFEVENKLEPERKAQLAKELGLQPRQVAIWFQNRRARFKNKQLEKEYDSLKVSFDKLKADHDNLLKENGSLKNEIDS 164
                        9**************************************************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MNVIFQNEKL PCSSDVLESI WVPTSSSSFH GSNSMVNFES ASGEDSLDRS FFRPIDKENG  60
DDDYDASLNQ PGKKRRLTVD QVQFLEKNFE VENKLEPERK AQLAKELGLQ PRQVAIWFQN  120
RRARFKNKQL EKEYDSLKVS FDKLKADHDN LLKENGSLKN EIDSLKDMLI LKDKGKPGKR  180
NLELHDANNI ISSDVKPQSA TPNAASDNVP MVVCKQEDAS SAKSDVFDSD SPHCTENHSS  240
LLEPADSSHV FEPAEQSDFS QDEDDDLSRT LLPPPYFLKL EDSCYDEPPA SSSNFVFPME  300
DQQPFCFWPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121129RRARFKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-40HD-ZIP family protein