PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1069340.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 423aa MW: 44730.4 Da PI: 7.5778 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 126.1 | 3.8e-39 | 57 | 153 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ Pd.00g1069340.m01 57 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSAPshyl 148 789******************************************************************99976666666666444444444 PP TCP 89 ....k 89 + Pd.00g1069340.m01 149 rpnsS 153 44320 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence |
MEAENGIRCR PNFPLQFLDK NQDDDIQEAP GDPGSNQNRP GSSLTQEQQP NNGKKPPPKR 60 TSTKDRHTKV DGRGRRIRMP ATCAARVFQL TRELGHKSDG ETIEWLLQQA EPAVIAATGT 120 GTIPANFTSL NISLRSSGSS MSAPSHYLRP NSSNYFMNFN PNNLGAAAAS QLIMDENSQR 180 GRILFPGVGL LSSENSPSSS MLLNFNNAML EAKRELRDQG GSLGEVSEGG EASAMGRKRI 240 RPEQDLLSSS SSSSSSSQSS HHQMGISNSY MLQSASTGSI PASQSTIPAT FWMVANNPSS 300 GSGGGGHHVH EPPINPMWTI PSINNGINSN MYRGASVSSG GGHGLHFMNF APPPMAAILP 360 SHMGSTPHGG GGSIADSHLG VMAALNAYRP ILGGVMAEPP GGNNGQHSHH GADEGHDRDS 420 NAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47620.1 | 4e-44 | TCP family protein |