PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1060550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 251aa    MW: 28389.9 Da    PI: 7.4993
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1060550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19116166255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t eeAa a+++a+ +++g
  Pd.00g1060550.m01 116 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETSEEAALAYDRAAYRMRG 166
                        7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MPCLTEQWGD LPFKVDDSED MIVYSSLNDA LSFGWFPDHS LYEYVKPEPL LYDPFDHHHA  60
VPNLFTQFQQ YHDVNNAPII LPFEHHHHRD DQKQVQVVDA ADQNKAPKSG VARGRHYRGV  120
RQRPWGKFAA EIRDPAKNGA RVWLGTYETS EEAALAYDRA AYRMRGCKAL LNFPHRIGLN  180
EPPPVRVTGK RKEPEAEAAA AADALTTTPK SAKRTKASSV AEHDHHQANV LRTRQKNSMG  240
LLPLGEQLLV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-54ERF family protein