PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1060380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 90aa    MW: 10432 Da    PI: 10.4794
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1060380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding377.6e-123341346
                       HHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding 13 vdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                       +++ +q+G++ W++Ia +++ gRt++++k++w +
  Pd.00g1060380.m01  3 IQLQAQFGNK-WAKIATYLP-GRTDNDVKNFWST 34
                       78999*****.*********.***********65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MVIQLQAQFG NKWAKIATYL PGRTDNDVKN FWSTRRKRFE RILQKSTSLN NRGKSPLVRH  60
ELPEVKVPPD PCSSAIEEGT SCCNQWRRCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.11e-20MYB family protein