PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1058800.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 303aa MW: 33907.1 Da PI: 5.0159 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 113.3 | 1.6e-35 | 27 | 117 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y++++d++++++isw+++g+sfvv++++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k+l Pd.00g1058800.m01 27 FLTKTYQLVDDPTIDDVISWNDDGSSFVVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVIPDR---------WEFSNDCFRRGEKRL 109 9****************************************************************999.........*************** PP XXXXXXXX CS HSF_DNA-bind 94 lekikrkk 101 l++i+r++ Pd.00g1058800.m01 110 LCEIQRRR 117 ******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MAPTSVEPNG GESTSGESSH RALPTPFLTK TYQLVDDPTI DDVISWNDDG SSFVVWNPTV 60 FARDLLPKYF KHNNFSSFVR QLNTYGFRKV IPDRWEFSND CFRRGEKRLL CEIQRRRIMP 120 PVPSVAVSPM VTAAVVPNAK PMISPSNSGE EQVISSSSSP IRAPSELMDE NEKLRKENMQ 180 LTKELAEVKS LCNNIFSMVS NYAYAQSESG FPYVKPLDLM PEKRFSGDGE KEEEEVSPKL 240 FGVAIGAKRG RETVGDGVEV EETGLRLQQP SGGGDVKSEP LDVDRQETPW LNQRHMANQR 300 VCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 1e-89 | HSF family protein |