PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1056140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 545aa MW: 61117 Da PI: 7.7197 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.3 | 0.001 | 80 | 100 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk+F + + H+r H Pd.00g1056140.m01 80 CKVCGKRFDSMKAMFGHMRHH 100 *******************99 PP | |||||||
2 | zf-C2H2 | 16.4 | 2.5e-05 | 111 | 131 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+dCgk F + L+ H + H Pd.00g1056140.m01 111 CKDCGKAFESLRALTAHTKIH 131 99****************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MEHRCKLCNK TFSGGKVLGG HMRGHGTKNS AKAEKKLKVS NVDFEGDDDE HAGYGLRVNP 60 KKSWKFSGSK VQASEKESLC KVCGKRFDSM KAMFGHMRHH SSRERKETQC CKDCGKAFES 120 LRALTAHTKI HSKRLRTSDG SQSISSEKLF VDFQYSTETM GLIRRKRSKR LRYKITPSSS 180 FSGMNESKYA TEFGQEVVDG AICLMIISRG GINWGRISSV TESSDNNSLS LEVQSPVQKN 240 RIMGNRGGIS VCNDTGNKIF EFGENDSGFA SDEEKTGKLE VPIDRFYRGA ECKRPKLDED 300 SAFVGYDAEI EKESHGEMEA ILTEVTEVEL DVDIIEEEEL DVTKLGSMKS GMKACDSGNN 360 MLYGTESEIF ADSRKKREHK CRTCKKLFRS HQALGGHQRV HKATNNCSGE KIVDSEDKIQ 420 INKLSKIEYS CKLAKLECTD NSEEQEMERA TVTGFESKVH RCSICLKVFA TGQALGGHKR 480 VHFGKDSETG TEQTRALKQQ ISEICDVFEL SQPVKLEEEN GDVEFKSWWL GNEHKCELLV 540 GLMPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 6e-18 | C2H2 family protein |