PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1053590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 334aa MW: 37750.1 Da PI: 4.7292 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.4e-21 | 77 | 130 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k Pd.00g1053590.m01 77 KKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 130 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 135.3 | 2.1e-43 | 76 | 167 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ +qv++LE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ ke+++L++e+ Pd.00g1053590.m01 76 EKKRRLTPDQVHMLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSLLSNYDSILKENQKLKSEVV 167 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MEPCRFFFDP STTSSACQQG GGNMLFLGNA DHVFRGPRSV MGLMDQESSR RRSFFSSSSS 60 QDELFDEEYY DEQLPEKKRR LTPDQVHMLE KSFETENKLE PERKTQLAKK LGLQPRQVAV 120 WFQNRRARWK TKQLERDYDL LKSSYDSLLS NYDSILKENQ KLKSEVVSIN QKLEAKEETS 180 NIKAAAFAPD HDDDDKCDPP VPAGDEMRDA VPISYAAGLQ YSCSVKVEDR LSSGSGGSAV 240 VDEAEGPQLV DSGDSYNFLN EDNLKVEGRG LQWEQVVAKR PDMFHLSSQL FSCTQRDAEN 300 GVPEVEREGT SCFALLGLCQ LRDTPRLVIT CKII |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 133 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 4e-58 | HD-ZIP family protein |