PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1053040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 186aa    MW: 21064.2 Da    PI: 9.4452
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1053040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-081567655
                       HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-..STCHHHHHHHHHHHHHHH CS
                HLH  6 nerErrRRdriNsafeeLrellPk.askapskK..lsKaeiLekAveYIksLq 55
                       + +Er+RR ++++  ++L +l+P   sk+++ K  ls      +A  YIk+L+
  Pd.00g1053040.m01 15 KTVERNRRIHMKDLCFKLASLVPLqHSKPSNSKdtLSQQNQIDLASSYIKQLR 67
                       679*********************777555555569999************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEKSSGESSS KLDRKTVERN RRIHMKDLCF KLASLVPLQH SKPSNSKDTL SQQNQIDLAS  60
SYIKQLRERI ENLKERKEKA MRSQLGIDVN STIDADNAMM VRSRLPVIEL KDSGSIIEVM  120
LISGLNKNFK LYEVISVLEE EGAEVISASF STVGDKVFHS LHAQVKISRV GVETSTVWQR  180
LQDLIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-30bHLH family protein