PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1045610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 525aa MW: 58608.2 Da PI: 4.8479

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1045610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.8	0.00011	341	374	17	55
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N+++ Lr+++P+ + ++Ka++L +++Y+k+L+ Pd.00g1045610.m01 341 NEKLLVLRSMVPSiS------EVDKASVLDDTIKYLKELE 374 89999******66......8*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
LPSLPGRALA NGQTIWLCDA QYADSKVFSR SLLAKSASIQ TVVCFPYLGG VVELGVTELV 60 PEDLSLIQHI KASLLDFSKP DCSEKSSSAP HKADDDSDQV LAKVDHEIVD TLALENLYSP 120 SEEIKFDPMG INDLHGNHEE FNMDSPEECS NGCEHNHQTE DSFMPEGIND GASQVQSWHF 180 MDEDFSIGVQ DSMNSSDCIS EVFVNKKRAH SSPRHESVNR NHLKELQNFN DTKFSSLDLG 240 PADDHIHYTR TLSNILGSST RLTENPCSCD GDCKSSFVTW KKGVVDNCRP TVHQKILKKI 300 LFTVPLMCGA SSQNTIQDGL SKLQSDDIHK GHVMPDKLKE NEKLLVLRSM VPSISEVDKA 360 SVLDDTIKYL KELEARAEEM ESCMDTVEAI ARRKYLDSAE KTSDNYDKIN MDNVKKPWLN 420 KRKACDIDET DPDLNRLVPR ESLPLDVKVI LKEQEVLIEM RCPYREYILL DIMDAINNLY 480 LDAHSVQSST LDGVLTLSLT SKFRGAAVAP VGMIKQALWK IAGKC

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

LPSLPGRALA NGQTIWLCDA QYADSKVFSR SLLAKSASIQ TVVCFPYLGG VVELGVTELV  60
PEDLSLIQHI KASLLDFSKP DCSEKSSSAP HKADDDSDQV LAKVDHEIVD TLALENLYSP  120
SEEIKFDPMG INDLHGNHEE FNMDSPEECS NGCEHNHQTE DSFMPEGIND GASQVQSWHF  180
MDEDFSIGVQ DSMNSSDCIS EVFVNKKRAH SSPRHESVNR NHLKELQNFN DTKFSSLDLG  240
PADDHIHYTR TLSNILGSST RLTENPCSCD GDCKSSFVTW KKGVVDNCRP TVHQKILKKI  300
LFTVPLMCGA SSQNTIQDGL SKLQSDDIHK GHVMPDKLKE NEKLLVLRSM VPSISEVDKA  360
SVLDDTIKYL KELEARAEEM ESCMDTVEAI ARRKYLDSAE KTSDNYDKIN MDNVKKPWLN  420
KRKACDIDET DPDLNRLVPR ESLPLDVKVI LKEQEVLIEM RCPYREYILL DIMDAINNLY  480
LDAHSVQSST LDGVLTLSLT SKFRGAAVAP VGMIKQALWK IAGKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	3e-95	bHLH family protein