PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g104450.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 652aa MW: 73183.1 Da PI: 7.235

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g104450.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.3e-09	402	439	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + Pd.00g104450.m01 402 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 439 554459******************************88 PP
2	BELL	114	8e-37	264	334	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + elqk+k++Lls+leeV++rYk+y++q+++v+ssFe+vag g+a++Y +lA ka+SrhFr+Lkd i++qi Pd.00g104450.m01 264 FVELQKRKTRLLSMLEEVERRYKHYCDQMKAVVSSFETVAGAGAATVYSALAAKAMSRHFRSLKDGIVSQI 334 679*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MAGQLSEAKP RNMVSSSVGF CYSDVSSNPT IHQTQFTNQI QDFGSNPEIF NLTTGMEMIG 60 FPKQNESNNN SAMWKAGFFG KPGNHQAGPS SSKTINESTS SDFYHHQHEF NNKQPDFSTG 120 ISETSSDHHQ NLMVGPQHQD SSGAWQENRF LVDDSSLRDS VGLFGKPSAN MQQQMNMMQD 180 GFFGKATASS SLHPEGLFHL RNSKYLAPAQ QLLNEFCSLG TKPSTDHHHP SKQKPHKNKL 240 WEQEDNGTTS SSRNKESNIY SLEFVELQKR KTRLLSMLEE VERRYKHYCD QMKAVVSSFE 300 TVAGAGAATV YSALAAKAMS RHFRSLKDGI VSQIQVTRKA MGEKDPVAPG TTKGETPRLR 360 ILDQTLRQQR AFQQMNMMES HPWRPQRGLP ERSVSVLRAW LFEHFLHPYP SDVDKHILAR 420 QTGLSRSQVS NWFINARVRL WKPMVEEMYL EETKERENKM NNLTSSDGIT TDPGDSSRSG 480 QNPLHIRPED QKPTPDQLVR IDSECLSSII TNPDKNHDSR SSKSTLLNHH MHPQQSFGRV 540 NESFGTMELD FSSYNHHQQH SGGTVSYAND HHHNPNQGFN GGGVSLTLGL QQHGGNGVSL 600 AFSPASQSSL FYPRDHIEEC QPVQYSLLDG EGQNTLPYRN LMGAQLLHDL AG

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MAGQLSEAKP RNMVSSSVGF CYSDVSSNPT IHQTQFTNQI QDFGSNPEIF NLTTGMEMIG  60
FPKQNESNNN SAMWKAGFFG KPGNHQAGPS SSKTINESTS SDFYHHQHEF NNKQPDFSTG  120
ISETSSDHHQ NLMVGPQHQD SSGAWQENRF LVDDSSLRDS VGLFGKPSAN MQQQMNMMQD  180
GFFGKATASS SLHPEGLFHL RNSKYLAPAQ QLLNEFCSLG TKPSTDHHHP SKQKPHKNKL  240
WEQEDNGTTS SSRNKESNIY SLEFVELQKR KTRLLSMLEE VERRYKHYCD QMKAVVSSFE  300
TVAGAGAATV YSALAAKAMS RHFRSLKDGI VSQIQVTRKA MGEKDPVAPG TTKGETPRLR  360
ILDQTLRQQR AFQQMNMMES HPWRPQRGLP ERSVSVLRAW LFEHFLHPYP SDVDKHILAR  420
QTGLSRSQVS NWFINARVRL WKPMVEEMYL EETKERENKM NNLTSSDGIT TDPGDSSRSG  480
QNPLHIRPED QKPTPDQLVR IDSECLSSII TNPDKNHDSR SSKSTLLNHH MHPQQSFGRV  540
NESFGTMELD FSSYNHHQQH SGGTVSYAND HHHNPNQGFN GGGVSLTLGL QQHGGNGVSL  600
AFSPASQSSL FYPRDHIEEC QPVQYSLLDG EGQNTLPYRN LMGAQLLHDL AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-144	TALE family protein