PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1033660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 372aa MW: 38597.8 Da PI: 6.8054 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 113.7 | 2.5e-35 | 86 | 192 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnss 86 ++++ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a+ ai+++tgt++ +a ++ + + s sa+ Pd.00g1033660.m01 86 PTRRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEDAIIQATGTGTVPAIAVsvggtlkIPTTASTSAD--- 174 57999***********************************************************8888854444433221111112222... PP TCP 87 sgkaaksaakskksqksaa 105 +++++s++++k+++ s++ Pd.00g1033660.m01 175 -DNSSPSSTTKKRKRPSNS 192 .122333322222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MTSYLEDQDD DGGTSDLSTS TGDPEDNNNN GNGVVSKQPN FDETTAFQQL KEEPIDSDPP 60 PQAHSIGMVP VAMQMPMSVA VPVSNPTRRA STKDRHTKVE GRGRRIRIPA TCAARIFQLT 120 RELGHKSDGE TVRWLLEHAE DAIIQATGTG TVPAIAVSVG GTLKIPTTAS TSADDNSSPS 180 STTKKRKRPS NSEFVDVKND AVTQSSGLAP VGPAAPQGLV PVWAVGGAGL MVPANAFWMG 240 PVGSGGGPSG PQPQIWALSP TVTPVFNVAG ATRPVSSFVA NNGGGVEVRA PSPALSNSAA 300 STSTVGPRAA KRSSTTMAPS VSSSSNNSNG SGSGASKAQM LRDFSLEIYD KQELQFMGRP 360 VGTPTTHQHQ TQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 2e-55 | TCP family protein |