PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1033570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 358aa MW: 39874 Da PI: 4.5137

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1033570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.8	3.3e-12	17	108	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 ffk+ +++ r+ +p +f+ ++g++ s + l+ ++g ++e++l r++ ++ +++ kGW eF k L+ g +vF ++g+s+f Pd.00g1033570.m01 17 FFKII--LEDSSKIRIKIPTRFLMKYGEN--LSSPVNLKLPNGAEMEIEL--RRCNNGgVWFDKGWPEFSKFCSLDYGSWLVFGYEGNSNF- 101 56666..56677788*********977..66679999*******..55555559***********************9999. PP .EEEEE-S CS B3 92 lvvkvfrk 99 +v +f++ Pd.00g1033570.m01 102 -HVLIFDR 108 .***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MASLRNPPTF SASIPHFFKI ILEDSSKIRI KIPTRFLMKY GENLSSPVNL KLPNGAEMEI 60 ELRRCNNGGV WFDKGWPEFS KFCSLDYGSW LVFGYEGNSN FHVLIFDRTA TEIEYPKPEM 120 EETDSEEEEE EQDDADDGSV EILDYGWLGF VRDNNLEVDD VCVFSLIEDV KLSFDVVFFR 180 TTEEAANCPL SPGRHDFPTK KGGGGTSSNR TKKGGGGTSS NRTGKATALD RANAFRSQNP 240 SSFIVSIRPS YINGRWRLWL PSKFYKLSPS IKHSCEVILQ VSNGRTWSVG LSKGRPRFTH 300 GAKCTNDGEQ IVPTKEETDN EDVDSSDDSS NDSSDDSGDD LSDDSGIRIL SESSSTNV

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MASLRNPPTF SASIPHFFKI ILEDSSKIRI KIPTRFLMKY GENLSSPVNL KLPNGAEMEI  60
ELRRCNNGGV WFDKGWPEFS KFCSLDYGSW LVFGYEGNSN FHVLIFDRTA TEIEYPKPEM  120
EETDSEEEEE EQDDADDGSV EILDYGWLGF VRDNNLEVDD VCVFSLIEDV KLSFDVVFFR  180
TTEEAANCPL SPGRHDFPTK KGGGGTSSNR TKKGGGGTSS NRTGKATALD RANAFRSQNP  240
SSFIVSIRPS YINGRWRLWL PSKFYKLSPS IKHSCEVILQ VSNGRTWSVG LSKGRPRFTH  300
GAKCTNDGEQ IVPTKEETDN EDVDSSDDSS NDSSDDSGDD LSDDSGIRIL SESSSTNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49475.1	2e-20	B3 family protein