PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1030760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YB | ||||||||
Protein Properties | Length: 1060aa MW: 117071 Da PI: 5.389 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 183 | 2.4e-57 | 913 | 1009 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++y Pd.00g1030760.m01 913 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLTRY 1002 59**************************************************************************************** PP NF-YB 91 relegek 97 re+eg++ Pd.00g1030760.m01 1003 REMEGDT 1009 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1060 aa Download sequence |
MEISLRLFSL LLLIASSSAQ MPGFVSLDCG GKGVFTDDLG LEWTPDQLNY GETSLISVAN 60 DTRKQYSTLR HFPADSRKYC YTMNVTSRTR YLLRATFLYG NFDNNNVYPK FDISLGATHW 120 STIFISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF 180 YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR 240 DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN 300 SEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE 360 KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT 420 GDIPSDLTKL SGLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL 480 KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGS RVNIIIGTSV GAAVLVIVTI 540 VSCVLLRKGK KKYYDQDHQL GRPLPRQGLL STKSDSAPTE AAHCFSYSEI EEATRNFEKK 600 IGSGGFGVVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LIQFLGYCQE 660 DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKVDGASH VSSIVRGTVG 720 YLDPEYYISQ QLTDKSDVYS FGVILLELIS GQEAISNENF GVNCRNIVQW AKLHIESGDI 780 QGIIDPSLQG EYDVQSMWKI AEKALMCVQA HGFMRPSISE VLKEIQDAIS MERDAGAARD 840 GTSDASRNSI PSSLNLGSMD LGGTDNFLSI DESIARPTAR PLNINRVSMA EAPGSPGGGS 900 HESGGDQSPR SNVREQDRYL PIANISRIMK KALPANGKIA KDAKETVQEC VSEFISFITS 960 EASDKCQREK RKTINGDDLL WAMATLGFED YIDPLKVYLT RYREMEGDTK GSGKGGDSSS 1020 KKDAQPSSNA QISRQGSFSQ GGNYSNSQSQ HMMVPMQGTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 1e-65 | NF-YB family protein |